Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.34■□□□□ 0.37
Six1Q62231 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.34■□□□□ 0.37
Six1Q62231 Gm38027-201ENSMUST00000192315 235 ntBASIC17.34■□□□□ 0.37
Six1Q62231 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.34■□□□□ 0.37
Six1Q62231 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Six1Q62231 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.34■□□□□ 0.37
Six1Q62231 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six1Q62231 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six1Q62231 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.33■□□□□ 0.37
Six1Q62231 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six1Q62231 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Six1Q62231 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.33■□□□□ 0.36
Six1Q62231 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.33■□□□□ 0.36
Six1Q62231 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Six1Q62231 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Six1Q62231 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Six1Q62231 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.33■□□□□ 0.36
Six1Q62231 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six1Q62231 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Six1Q62231 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.32■□□□□ 0.36
Six1Q62231 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.32■□□□□ 0.36
Six1Q62231 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.32■□□□□ 0.36
Six1Q62231 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Six1Q62231 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Six1Q62231 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Six1Q62231 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Six1Q62231 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six1Q62231 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Six1Q62231 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Six1Q62231 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Six1Q62231 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Six1Q62231 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.31■□□□□ 0.36
Six1Q62231 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.31■□□□□ 0.36
Six1Q62231 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.31■□□□□ 0.36
Six1Q62231 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six1Q62231 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six1Q62231 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Six1Q62231 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Six1Q62231 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six1Q62231 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms