Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sycp1Q62209 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Sycp1Q62209 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sycp1Q62209 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.96■□□□□ 0.63
Sycp1Q62209 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sycp1Q62209 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.96■□□□□ 0.63
Sycp1Q62209 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sycp1Q62209 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sycp1Q62209 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sycp1Q62209 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.95■□□□□ 0.62
Sycp1Q62209 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.95■□□□□ 0.62
Sycp1Q62209 Gm38027-201ENSMUST00000192315 235 ntBASIC18.95■□□□□ 0.62
Sycp1Q62209 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sycp1Q62209 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Gm3375-201ENSMUST00000203929 796 ntBASIC18.94■□□□□ 0.62
Sycp1Q62209 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.94■□□□□ 0.62
Sycp1Q62209 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sycp1Q62209 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Sycp1Q62209 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sycp1Q62209 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sycp1Q62209 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sycp1Q62209 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.93■□□□□ 0.62
Sycp1Q62209 Odf3b-204ENSMUST00000227834 930 ntBASIC18.93■□□□□ 0.62
Sycp1Q62209 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sycp1Q62209 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sycp1Q62209 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sycp1Q62209 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sycp1Q62209 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sycp1Q62209 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Sycp1Q62209 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.92■□□□□ 0.62
Sycp1Q62209 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.92■□□□□ 0.62
Sycp1Q62209 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.92■□□□□ 0.62
Sycp1Q62209 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Gm21814-202ENSMUST00000203277 873 ntBASIC18.92■□□□□ 0.62
Sycp1Q62209 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.92■□□□□ 0.62
Sycp1Q62209 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.92■□□□□ 0.62
Sycp1Q62209 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sycp1Q62209 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sycp1Q62209 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms