Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scnn1aQ61180 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scnn1aQ61180 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.42■□□□□ 0.7
Scnn1aQ61180 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Scnn1aQ61180 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.42■□□□□ 0.7
Scnn1aQ61180 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scnn1aQ61180 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scnn1aQ61180 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scnn1aQ61180 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.4■□□□□ 0.7
Scnn1aQ61180 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scnn1aQ61180 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scnn1aQ61180 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scnn1aQ61180 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scnn1aQ61180 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Scnn1aQ61180 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms