Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scarb1Q61009 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.29□□□□□ -0.12
Scarb1Q61009 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Scarb1Q61009 Gm2399-201ENSMUST00000104944 225 ntBASIC14.29□□□□□ -0.12
Scarb1Q61009 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.29□□□□□ -0.12
Scarb1Q61009 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.29□□□□□ -0.12
Scarb1Q61009 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Scarb1Q61009 Gm18671-201ENSMUST00000214826 683 ntBASIC14.29□□□□□ -0.12
Scarb1Q61009 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scarb1Q61009 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.29□□□□□ -0.12
Scarb1Q61009 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb1Q61009 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scarb1Q61009 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Scarb1Q61009 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.28□□□□□ -0.12
Scarb1Q61009 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.28□□□□□ -0.12
Scarb1Q61009 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Zfp783-201ENSMUST00000095946 670 ntBASIC14.28□□□□□ -0.12
Scarb1Q61009 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scarb1Q61009 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb1Q61009 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.27□□□□□ -0.12
Scarb1Q61009 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.27□□□□□ -0.12
Scarb1Q61009 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scarb1Q61009 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
Scarb1Q61009 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb1Q61009 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.27□□□□□ -0.12
Scarb1Q61009 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scarb1Q61009 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Scarb1Q61009 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb1Q61009 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scarb1Q61009 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Scarb1Q61009 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scarb1Q61009 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Scarb1Q61009 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Scarb1Q61009 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Scarb1Q61009 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.26□□□□□ -0.13
Scarb1Q61009 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb1Q61009 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.26□□□□□ -0.13
Scarb1Q61009 Gm7291-201ENSMUST00000199147 382 ntBASIC14.26□□□□□ -0.13
Scarb1Q61009 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms