Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Atp13a4Q5XF90 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp13a4Q5XF90 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp13a4Q5XF90 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Gm7889-201ENSMUST00000185591 958 ntBASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp13a4Q5XF90 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp13a4Q5XF90 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Gm2274-201ENSMUST00000184539 609 ntBASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp13a4Q5XF90 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp13a4Q5XF90 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp13a4Q5XF90 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms