Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Gm18958-201ENSMUST00000174258 762 ntBASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shroom1Q5SX79 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Gm11950-201ENSMUST00000121615 838 ntBASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shroom1Q5SX79 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Gm10566-201ENSMUST00000086739 996 ntBASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shroom1Q5SX79 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Shroom1Q5SX79 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Shroom1Q5SX79 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shroom1Q5SX79 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms