Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-3Q5R1E6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-3Q5R1E6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-3Q5R1E6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.58□□□□□ -0.23
Trav6-3Q5R1E6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-3Q5R1E6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-3Q5R1E6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Gm15378-201ENSMUST00000121894 207 ntBASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-3Q5R1E6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-3Q5R1E6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gm5643-201ENSMUST00000117081 966 ntBASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gm9731-201ENSMUST00000209480 747 ntBASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6-3Q5R1E6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms