Protein–RNA interactions for Protein: Q5M8M2

Odf3b, Outer dense fiber protein 3B, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf3bQ5M8M2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Odf3bQ5M8M2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Odf3bQ5M8M2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Odf3bQ5M8M2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Odf3bQ5M8M2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Gm10653-202ENSMUST00000139570 835 ntBASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Odf3bQ5M8M2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Gm17661-201ENSMUST00000170317 270 ntBASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Odf3bQ5M8M2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Dancr-204ENSMUST00000132389 2347 ntBASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Odf3bQ5M8M2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Odf3bQ5M8M2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Odf3bQ5M8M2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.29□□□□□ -0.76
Odf3bQ5M8M2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms