Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Gm17807-201ENSMUST00000186869 298 ntBASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38aQ4FK66 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38aQ4FK66 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Gm44450-201ENSMUST00000199528 114 ntBASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38aQ4FK66 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prpf38aQ4FK66 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Gm28033-201ENSMUST00000184224 96 ntBASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Prpf38aQ4FK66 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38aQ4FK66 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms