Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shank3Q4ACU6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.08■□□□□ 0.97
Shank3Q4ACU6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shank3Q4ACU6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shank3Q4ACU6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shank3Q4ACU6 Gm10175-201ENSMUST00000086013 645 ntBASIC21.08■□□□□ 0.97
Shank3Q4ACU6 Gm10355-201ENSMUST00000097146 517 ntBASIC21.08■□□□□ 0.97
Shank3Q4ACU6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shank3Q4ACU6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shank3Q4ACU6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.08■□□□□ 0.96
Shank3Q4ACU6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Shank3Q4ACU6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Shank3Q4ACU6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shank3Q4ACU6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Gm12260-201ENSMUST00000122447 411 ntBASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Gm25745-201ENSMUST00000174945 133 ntBASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Gm14494-201ENSMUST00000118786 435 ntBASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Gm14140-201ENSMUST00000119999 995 ntBASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shank3Q4ACU6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Gm13036-201ENSMUST00000117799 748 ntBASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Gm15467-201ENSMUST00000120582 445 ntBASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank3Q4ACU6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank3Q4ACU6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Gm6550-201ENSMUST00000187574 993 ntBASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shank3Q4ACU6 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Shank3Q4ACU6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shank3Q4ACU6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Shank3Q4ACU6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms