Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
Carmil3Q3UFQ8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Carmil3Q3UFQ8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Carmil3Q3UFQ8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Carmil3Q3UFQ8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Carmil3Q3UFQ8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Gm43347-201ENSMUST00000200226 580 ntBASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil3Q3UFQ8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil3Q3UFQ8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil3Q3UFQ8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil3Q3UFQ8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Gm5864-201ENSMUST00000202263 970 ntBASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil3Q3UFQ8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil3Q3UFQ8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil3Q3UFQ8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil3Q3UFQ8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil3Q3UFQ8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil3Q3UFQ8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil3Q3UFQ8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Gm15372-201ENSMUST00000120729 834 ntBASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Gm44450-201ENSMUST00000199528 114 ntBASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil3Q3UFQ8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms