Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Gm44872-201ENSMUST00000207864 420 ntBASIC21.04■□□□□ 0.96
Vars2Q3U2A8 AC159114.1-201ENSMUST00000220349 266 ntBASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vars2Q3U2A8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Fst-202ENSMUST00000223640 2612 ntBASIC21.03■□□□□ 0.96
Vars2Q3U2A8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC21.02■□□□□ 0.96
Vars2Q3U2A8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Vars2Q3U2A8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC21.02■□□□□ 0.96
Vars2Q3U2A8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vars2Q3U2A8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.02■□□□□ 0.96
Vars2Q3U2A8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vars2Q3U2A8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.02■□□□□ 0.96
Vars2Q3U2A8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vars2Q3U2A8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vars2Q3U2A8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vars2Q3U2A8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Vars2Q3U2A8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.02■□□□□ 0.95
Vars2Q3U2A8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Gm7222-201ENSMUST00000117512 906 ntBASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vars2Q3U2A8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Vars2Q3U2A8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21■□□□□ 0.95
Vars2Q3U2A8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vars2Q3U2A8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC21■□□□□ 0.95
Vars2Q3U2A8 Gm14701-201ENSMUST00000117156 348 ntBASIC21■□□□□ 0.95
Vars2Q3U2A8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC21■□□□□ 0.95
Vars2Q3U2A8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vars2Q3U2A8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21■□□□□ 0.95
Vars2Q3U2A8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vars2Q3U2A8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vars2Q3U2A8 Gm15500-202ENSMUST00000071641 1019 ntBASIC21■□□□□ 0.95
Vars2Q3U2A8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vars2Q3U2A8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21■□□□□ 0.95
Vars2Q3U2A8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Vars2Q3U2A8 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Gm12497-201ENSMUST00000138778 237 ntBASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Vars2Q3U2A8 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Gm11025-201ENSMUST00000140773 466 ntBASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vars2Q3U2A8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms