Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Brca2P97929 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.3■□□□□ 0.2
Brca2P97929 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.3■□□□□ 0.2
Brca2P97929 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Brca2P97929 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Gm11336-201ENSMUST00000118168 334 ntBASIC16.3■□□□□ 0.2
Brca2P97929 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.3■□□□□ 0.2
Brca2P97929 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca2P97929 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Brca2P97929 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Brca2P97929 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Brca2P97929 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.29■□□□□ 0.2
Brca2P97929 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca2P97929 Gm27000-201ENSMUST00000182943 842 ntBASIC16.29■□□□□ 0.2
Brca2P97929 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.29■□□□□ 0.2
Brca2P97929 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.29■□□□□ 0.2
Brca2P97929 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Brca2P97929 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.28■□□□□ 0.2
Brca2P97929 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.28■□□□□ 0.2
Brca2P97929 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Brca2P97929 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.28■□□□□ 0.2
Brca2P97929 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.28■□□□□ 0.2
Brca2P97929 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.28■□□□□ 0.2
Brca2P97929 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.28■□□□□ 0.2
Brca2P97929 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca2P97929 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca2P97929 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Brca2P97929 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.27■□□□□ 0.2
Brca2P97929 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Brca2P97929 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca2P97929 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.27■□□□□ 0.2
Brca2P97929 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.27■□□□□ 0.2
Brca2P97929 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca2P97929 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.27■□□□□ 0.2
Brca2P97929 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.27■□□□□ 0.2
Brca2P97929 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.27■□□□□ 0.2
Brca2P97929 Gm15590-201ENSMUST00000078419 552 ntBASIC16.27■□□□□ 0.2
Brca2P97929 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca2P97929 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Brca2P97929 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Brca2P97929 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca2P97929 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca2P97929 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.27■□□□□ 0.19
Brca2P97929 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca2P97929 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca2P97929 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Brca2P97929 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca2P97929 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Brca2P97929 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca2P97929 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.26■□□□□ 0.19
Brca2P97929 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca2P97929 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.26■□□□□ 0.19
Brca2P97929 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Brca2P97929 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca2P97929 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Brca2P97929 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca2P97929 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Brca2P97929 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Brca2P97929 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms