Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PrkdcP97313 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PrkdcP97313 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.59□□□□□ -0.55
PrkdcP97313 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PrkdcP97313 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PrkdcP97313 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PrkdcP97313 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.59□□□□□ -0.55
PrkdcP97313 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.55
PrkdcP97313 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.58□□□□□ -0.55
PrkdcP97313 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
PrkdcP97313 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 Gm5682-201ENSMUST00000173402 505 ntBASIC11.58□□□□□ -0.56
PrkdcP97313 Gm44430-201ENSMUST00000203376 995 ntBASIC11.58□□□□□ -0.56
PrkdcP97313 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.58□□□□□ -0.56
PrkdcP97313 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Gm43006-201ENSMUST00000197702 1602 ntBASIC11.58□□□□□ -0.56
PrkdcP97313 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Gm11424-201ENSMUST00000121929 829 ntBASIC11.58□□□□□ -0.56
PrkdcP97313 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
PrkdcP97313 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PrkdcP97313 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.58□□□□□ -0.56
PrkdcP97313 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
PrkdcP97313 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PrkdcP97313 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.57□□□□□ -0.56
PrkdcP97313 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.57□□□□□ -0.56
PrkdcP97313 Gm25745-201ENSMUST00000174945 133 ntBASIC11.57□□□□□ -0.56
PrkdcP97313 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.57□□□□□ -0.56
PrkdcP97313 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PrkdcP97313 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PrkdcP97313 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
PrkdcP97313 Gm7222-201ENSMUST00000117512 906 ntBASIC11.57□□□□□ -0.56
PrkdcP97313 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.57□□□□□ -0.56
PrkdcP97313 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PrkdcP97313 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
PrkdcP97313 Gm43213-201ENSMUST00000151866 1790 ntBASIC11.57□□□□□ -0.56
PrkdcP97313 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PrkdcP97313 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.57□□□□□ -0.56
PrkdcP97313 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
PrkdcP97313 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
PrkdcP97313 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PrkdcP97313 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.57□□□□□ -0.56
PrkdcP97313 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.56□□□□□ -0.56
PrkdcP97313 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PrkdcP97313 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
PrkdcP97313 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.56□□□□□ -0.56
PrkdcP97313 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.56□□□□□ -0.56
PrkdcP97313 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.56□□□□□ -0.56
PrkdcP97313 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.56□□□□□ -0.56
PrkdcP97313 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
PrkdcP97313 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
PrkdcP97313 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.56□□□□□ -0.56
PrkdcP97313 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.56□□□□□ -0.56
PrkdcP97313 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
PrkdcP97313 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.56□□□□□ -0.56
PrkdcP97313 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.56□□□□□ -0.56
PrkdcP97313 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PrkdcP97313 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
PrkdcP97313 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
PrkdcP97313 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.55□□□□□ -0.56
PrkdcP97313 Mir6977-201ENSMUST00000184960 64 ntBASIC11.55□□□□□ -0.56
PrkdcP97313 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.55□□□□□ -0.56
PrkdcP97313 Gm2423-201ENSMUST00000074863 733 ntBASIC11.55□□□□□ -0.56
PrkdcP97313 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PrkdcP97313 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms