Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rpl39P62892 Gm13401-201ENSMUST00000117074 291 ntBASIC12.11□□□□□ -0.47
Rpl39P62892 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Rpl39P62892 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpl39P62892 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpl39P62892 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rpl39P62892 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rpl39P62892 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Rpl39P62892 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rpl39P62892 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpl39P62892 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.1□□□□□ -0.47
Rpl39P62892 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rpl39P62892 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpl39P62892 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.1□□□□□ -0.47
Rpl39P62892 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl39P62892 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rpl39P62892 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rpl39P62892 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Gm2399-201ENSMUST00000104944 225 ntBASIC12.09□□□□□ -0.47
Rpl39P62892 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.09□□□□□ -0.47
Rpl39P62892 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Rpl39P62892 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.09□□□□□ -0.47
Rpl39P62892 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl39P62892 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rpl39P62892 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rpl39P62892 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rpl39P62892 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpl39P62892 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rpl39P62892 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.08□□□□□ -0.48
Rpl39P62892 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rpl39P62892 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.08□□□□□ -0.48
Rpl39P62892 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.08□□□□□ -0.48
Rpl39P62892 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl39P62892 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.07□□□□□ -0.48
Rpl39P62892 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rpl39P62892 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms