Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Lsm6P62313 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Lsm6P62313 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lsm6P62313 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.81□□□□□ -0.04
Lsm6P62313 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Gm27463-201ENSMUST00000183569 57 ntBASIC14.81□□□□□ -0.04
Lsm6P62313 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm6P62313 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lsm6P62313 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lsm6P62313 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm6P62313 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.8□□□□□ -0.04
Lsm6P62313 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lsm6P62313 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.8□□□□□ -0.04
Lsm6P62313 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Gm18958-201ENSMUST00000174258 762 ntBASIC14.8□□□□□ -0.04
Lsm6P62313 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.8□□□□□ -0.04
Lsm6P62313 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.8□□□□□ -0.04
Lsm6P62313 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Lsm6P62313 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm6P62313 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Gm13216-201ENSMUST00000117145 591 ntBASIC14.79□□□□□ -0.04
Lsm6P62313 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Lsm6P62313 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm6P62313 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm6P62313 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lsm6P62313 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm6P62313 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm6P62313 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm6P62313 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.78□□□□□ -0.04
Lsm6P62313 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.78□□□□□ -0.04
Lsm6P62313 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm6P62313 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm6P62313 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm6P62313 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.77□□□□□ -0.04
Lsm6P62313 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms