Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.69■□□□□ 0.74
Cacnb3P54285 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cacnb3P54285 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Cacnb3P54285 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cacnb3P54285 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cacnb3P54285 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.68■□□□□ 0.74
Cacnb3P54285 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
Cacnb3P54285 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Cacnb3P54285 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb3P54285 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.67■□□□□ 0.74
Cacnb3P54285 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cacnb3P54285 AW822252-206ENSMUST00000208904 237 ntBASIC19.67■□□□□ 0.74
Cacnb3P54285 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb3P54285 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.67■□□□□ 0.74
Cacnb3P54285 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cacnb3P54285 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.66■□□□□ 0.74
Cacnb3P54285 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.66■□□□□ 0.74
Cacnb3P54285 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.66■□□□□ 0.74
Cacnb3P54285 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Cacnb3P54285 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.66■□□□□ 0.74
Cacnb3P54285 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.66■□□□□ 0.74
Cacnb3P54285 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacnb3P54285 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.66■□□□□ 0.74
Cacnb3P54285 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cacnb3P54285 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb3P54285 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.65■□□□□ 0.74
Cacnb3P54285 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Cacnb3P54285 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.65■□□□□ 0.74
Cacnb3P54285 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cacnb3P54285 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cacnb3P54285 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacnb3P54285 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cacnb3P54285 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacnb3P54285 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacnb3P54285 Gm29707-201ENSMUST00000196325 491 ntBASIC19.64■□□□□ 0.73
Cacnb3P54285 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacnb3P54285 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacnb3P54285 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.64■□□□□ 0.73
Cacnb3P54285 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cacnb3P54285 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cacnb3P54285 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacnb3P54285 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cacnb3P54285 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacnb3P54285 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cacnb3P54285 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.63■□□□□ 0.73
Cacnb3P54285 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cacnb3P54285 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.63■□□□□ 0.73
Cacnb3P54285 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 Gm10052-201ENSMUST00000168019 960 ntBASIC19.63■□□□□ 0.73
Cacnb3P54285 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacnb3P54285 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.63■□□□□ 0.73
Cacnb3P54285 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms