Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.73■□□□□ 0.43
Rfx2P48379 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx2P48379 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rfx2P48379 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Rfx2P48379 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rfx2P48379 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx2P48379 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Rfx2P48379 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx2P48379 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx2P48379 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx2P48379 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx2P48379 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rfx2P48379 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.72■□□□□ 0.43
Rfx2P48379 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.72■□□□□ 0.43
Rfx2P48379 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Gm6345-202ENSMUST00000180900 204 ntBASIC17.72■□□□□ 0.43
Rfx2P48379 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rfx2P48379 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rfx2P48379 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfx2P48379 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx2P48379 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rfx2P48379 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Mir1668-201ENSMUST00000184114 107 ntBASIC17.71■□□□□ 0.43
Rfx2P48379 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.71■□□□□ 0.43
Rfx2P48379 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rfx2P48379 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rfx2P48379 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Haglr-201ENSMUST00000100000 2085 ntBASIC17.71■□□□□ 0.43
Rfx2P48379 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.71■□□□□ 0.43
Rfx2P48379 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.71■□□□□ 0.43
Rfx2P48379 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx2P48379 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.71■□□□□ 0.42
Rfx2P48379 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rfx2P48379 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx2P48379 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfx2P48379 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.7■□□□□ 0.42
Rfx2P48379 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rfx2P48379 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rfx2P48379 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rfx2P48379 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfx2P48379 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx2P48379 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.69■□□□□ 0.42
Rfx2P48379 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfx2P48379 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfx2P48379 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rfx2P48379 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rfx2P48379 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Gm17661-201ENSMUST00000170317 270 ntBASIC17.69■□□□□ 0.42
Rfx2P48379 Gm33142-201ENSMUST00000193913 867 ntBASIC17.69■□□□□ 0.42
Rfx2P48379 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.69■□□□□ 0.42
Rfx2P48379 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rfx2P48379 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfx2P48379 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms