Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Cxcl12P40224 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.43■□□□□ 0.38
Cxcl12P40224 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cxcl12P40224 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cxcl12P40224 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.43■□□□□ 0.38
Cxcl12P40224 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cxcl12P40224 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cxcl12P40224 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Cxcl12P40224 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cxcl12P40224 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cxcl12P40224 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cxcl12P40224 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.42■□□□□ 0.38
Cxcl12P40224 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Cxcl12P40224 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl12P40224 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cxcl12P40224 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cxcl12P40224 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.41■□□□□ 0.38
Cxcl12P40224 Gm14494-201ENSMUST00000118786 435 ntBASIC17.41■□□□□ 0.38
Cxcl12P40224 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.41■□□□□ 0.38
Cxcl12P40224 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Gm15590-201ENSMUST00000078419 552 ntBASIC17.41■□□□□ 0.38
Cxcl12P40224 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cxcl12P40224 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.41■□□□□ 0.38
Cxcl12P40224 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl12P40224 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Cxcl12P40224 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cxcl12P40224 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.4■□□□□ 0.38
Cxcl12P40224 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Gm15173-201ENSMUST00000122049 433 ntBASIC17.4■□□□□ 0.38
Cxcl12P40224 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Gm7230-201ENSMUST00000173026 815 ntBASIC17.4■□□□□ 0.38
Cxcl12P40224 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
Cxcl12P40224 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.4■□□□□ 0.38
Cxcl12P40224 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.4■□□□□ 0.38
Cxcl12P40224 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.4■□□□□ 0.38
Cxcl12P40224 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cxcl12P40224 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl12P40224 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Gm14822-201ENSMUST00000122247 291 ntBASIC17.39■□□□□ 0.37
Cxcl12P40224 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.39■□□□□ 0.37
Cxcl12P40224 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.39■□□□□ 0.37
Cxcl12P40224 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.39■□□□□ 0.37
Cxcl12P40224 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.39■□□□□ 0.37
Cxcl12P40224 Gm44430-201ENSMUST00000203376 995 ntBASIC17.39■□□□□ 0.37
Cxcl12P40224 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.39■□□□□ 0.37
Cxcl12P40224 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cxcl12P40224 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.39■□□□□ 0.37
Cxcl12P40224 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms