Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Gm5417-201ENSMUST00000079706 384 ntBASIC16.07■□□□□ 0.16
Slc6a11P31650 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a11P31650 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a11P31650 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a11P31650 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Slc6a11P31650 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Gm10231-201ENSMUST00000181584 441 ntBASIC16.06■□□□□ 0.16
Slc6a11P31650 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.06■□□□□ 0.16
Slc6a11P31650 Gm10175-202ENSMUST00000208752 441 ntBASIC16.06■□□□□ 0.16
Slc6a11P31650 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.06■□□□□ 0.16
Slc6a11P31650 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a11P31650 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.06■□□□□ 0.16
Slc6a11P31650 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.05■□□□□ 0.16
Slc6a11P31650 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Slc6a11P31650 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.05■□□□□ 0.16
Slc6a11P31650 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.05■□□□□ 0.16
Slc6a11P31650 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Slc6a11P31650 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a11P31650 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.04■□□□□ 0.16
Slc6a11P31650 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Slc6a11P31650 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.04■□□□□ 0.16
Slc6a11P31650 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Slc6a11P31650 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.04■□□□□ 0.16
Slc6a11P31650 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a11P31650 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Slc6a11P31650 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc6a11P31650 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.03■□□□□ 0.16
Slc6a11P31650 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.03■□□□□ 0.16
Slc6a11P31650 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc6a11P31650 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Slc6a11P31650 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Slc6a11P31650 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a11P31650 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Slc6a11P31650 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Slc6a11P31650 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms