Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a13P31649 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a13P31649 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a13P31649 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a13P31649 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.15■□□□□ 0.34
Slc6a13P31649 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a13P31649 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a13P31649 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.15■□□□□ 0.34
Slc6a13P31649 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a13P31649 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a13P31649 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a13P31649 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a13P31649 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a13P31649 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a13P31649 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Gm16061-201ENSMUST00000122167 857 ntBASIC17.14■□□□□ 0.33
Slc6a13P31649 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.14■□□□□ 0.33
Slc6a13P31649 Gm9987-201ENSMUST00000069768 567 ntBASIC17.14■□□□□ 0.33
Slc6a13P31649 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a13P31649 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a13P31649 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Slc6a13P31649 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.13■□□□□ 0.33
Slc6a13P31649 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.13■□□□□ 0.33
Slc6a13P31649 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc6a13P31649 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a13P31649 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.12■□□□□ 0.33
Slc6a13P31649 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Mir5130-201ENSMUST00000175160 84 ntBASIC17.12■□□□□ 0.33
Slc6a13P31649 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Gm45058-201ENSMUST00000205810 766 ntBASIC17.12■□□□□ 0.33
Slc6a13P31649 Gm18959-201ENSMUST00000208954 655 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms