Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccl3P10855 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccl3P10855 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.92□□□□□ -0.02
Ccl3P10855 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Gm13312-201ENSMUST00000119631 718 ntBASIC14.92□□□□□ -0.02
Ccl3P10855 Rprl3-201ENSMUST00000157400 290 ntBASIC14.92□□□□□ -0.02
Ccl3P10855 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccl3P10855 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.92□□□□□ -0.02
Ccl3P10855 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccl3P10855 Gm5867-201ENSMUST00000063197 592 ntBASIC14.92□□□□□ -0.02
Ccl3P10855 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccl3P10855 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl3P10855 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccl3P10855 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccl3P10855 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.91□□□□□ -0.02
Ccl3P10855 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.91□□□□□ -0.02
Ccl3P10855 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccl3P10855 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.91□□□□□ -0.02
Ccl3P10855 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccl3P10855 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ccl3P10855 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccl3P10855 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccl3P10855 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.91□□□□□ -0.02
Ccl3P10855 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl3P10855 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccl3P10855 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ccl3P10855 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.9□□□□□ -0.02
Ccl3P10855 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.9□□□□□ -0.02
Ccl3P10855 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Ccl3P10855 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccl3P10855 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl3P10855 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.9□□□□□ -0.02
Ccl3P10855 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.9□□□□□ -0.02
Ccl3P10855 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccl3P10855 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.89□□□□□ -0.03
Ccl3P10855 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccl3P10855 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccl3P10855 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.89□□□□□ -0.03
Ccl3P10855 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms