Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sod1P08228 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sod1P08228 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
Sod1P08228 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.87■□□□□ 0.13
Sod1P08228 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.87■□□□□ 0.13
Sod1P08228 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sod1P08228 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.86■□□□□ 0.13
Sod1P08228 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.86■□□□□ 0.13
Sod1P08228 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sod1P08228 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Gm15165-201ENSMUST00000118140 502 ntBASIC15.86■□□□□ 0.13
Sod1P08228 Gm18733-201ENSMUST00000173950 856 ntBASIC15.86■□□□□ 0.13
Sod1P08228 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.86■□□□□ 0.13
Sod1P08228 Gm18195-201ENSMUST00000207604 706 ntBASIC15.86■□□□□ 0.13
Sod1P08228 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sod1P08228 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Sod1P08228 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sod1P08228 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.85■□□□□ 0.13
Sod1P08228 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.85■□□□□ 0.13
Sod1P08228 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.85■□□□□ 0.13
Sod1P08228 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Gm27867-201ENSMUST00000184778 125 ntBASIC15.85■□□□□ 0.13
Sod1P08228 Gm44454-201ENSMUST00000198541 138 ntBASIC15.85■□□□□ 0.13
Sod1P08228 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.85■□□□□ 0.13
Sod1P08228 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.85■□□□□ 0.13
Sod1P08228 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.85■□□□□ 0.13
Sod1P08228 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Sod1P08228 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sod1P08228 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sod1P08228 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Sod1P08228 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Sod1P08228 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.84■□□□□ 0.13
Sod1P08228 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.84■□□□□ 0.13
Sod1P08228 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.84■□□□□ 0.13
Sod1P08228 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.84■□□□□ 0.13
Sod1P08228 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.84■□□□□ 0.13
Sod1P08228 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Sod1P08228 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.84■□□□□ 0.13
Sod1P08228 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Sod1P08228 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sod1P08228 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sod1P08228 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.83■□□□□ 0.13
Sod1P08228 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sod1P08228 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sod1P08228 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sod1P08228 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sod1P08228 Gm6296-201ENSMUST00000222599 943 ntBASIC15.83■□□□□ 0.12
Sod1P08228 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sod1P08228 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sod1P08228 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sod1P08228 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Sod1P08228 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sod1P08228 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sod1P08228 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.82■□□□□ 0.12
Sod1P08228 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sod1P08228 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sod1P08228 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sod1P08228 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sod1P08228 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.82■□□□□ 0.12
Sod1P08228 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.82■□□□□ 0.12
Sod1P08228 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.82■□□□□ 0.12
Sod1P08228 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms