Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.39□□□□□ -0.43
P06328 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.39□□□□□ -0.43
P06328 Gm24841-201ENSMUST00000158676 357 ntBASIC12.39□□□□□ -0.43
P06328 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.39□□□□□ -0.43
P06328 Gm20049-201ENSMUST00000219950 730 ntBASIC12.39□□□□□ -0.43
P06328 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
P06328 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P06328 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.39□□□□□ -0.43
P06328 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06328 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
P06328 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
P06328 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.38□□□□□ -0.43
P06328 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Gm18666-201ENSMUST00000190039 958 ntBASIC12.38□□□□□ -0.43
P06328 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
P06328 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06328 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P06328 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.37□□□□□ -0.43
P06328 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.37□□□□□ -0.43
P06328 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P06328 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.37□□□□□ -0.43
P06328 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.37□□□□□ -0.43
P06328 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.37□□□□□ -0.43
P06328 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
P06328 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P06328 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P06328 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
P06328 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P06328 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P06328 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06328 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06328 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.36□□□□□ -0.43
P06328 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06328 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P06328 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
P06328 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms