Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.27■□□□□ 0.2
Best1O88870 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Gm18421-201ENSMUST00000204122 625 ntBASIC16.27■□□□□ 0.2
Best1O88870 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.27■□□□□ 0.2
Best1O88870 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Best1O88870 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Best1O88870 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Best1O88870 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Best1O88870 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.27■□□□□ 0.19
Best1O88870 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.27■□□□□ 0.19
Best1O88870 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.26■□□□□ 0.19
Best1O88870 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Ank2-226ENSMUST00000189368 339 ntBASIC16.26■□□□□ 0.19
Best1O88870 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.26■□□□□ 0.19
Best1O88870 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Best1O88870 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.26■□□□□ 0.19
Best1O88870 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Best1O88870 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.26■□□□□ 0.19
Best1O88870 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.25■□□□□ 0.19
Best1O88870 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Best1O88870 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Best1O88870 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Best1O88870 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Best1O88870 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.25■□□□□ 0.19
Best1O88870 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Best1O88870 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Best1O88870 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Best1O88870 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.24■□□□□ 0.19
Best1O88870 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Gm27742-201ENSMUST00000184667 60 ntBASIC16.24■□□□□ 0.19
Best1O88870 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.24■□□□□ 0.19
Best1O88870 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.24■□□□□ 0.19
Best1O88870 Gm10819-201ENSMUST00000099988 561 ntBASIC16.24■□□□□ 0.19
Best1O88870 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Best1O88870 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Best1O88870 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Best1O88870 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Best1O88870 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Best1O88870 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.23■□□□□ 0.19
Best1O88870 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Best1O88870 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Best1O88870 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.22■□□□□ 0.19
Best1O88870 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Best1O88870 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.22■□□□□ 0.19
Best1O88870 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Best1O88870 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms