Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClppO88696 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ClppO88696 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClppO88696 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.48■□□□□ 0.23
ClppO88696 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ClppO88696 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClppO88696 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClppO88696 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ClppO88696 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.47■□□□□ 0.23
ClppO88696 AA414768-201ENSMUST00000121924 1257 ntBASIC16.47■□□□□ 0.23
ClppO88696 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.47■□□□□ 0.23
ClppO88696 Il3ra-202ENSMUST00000223589 738 ntBASIC16.47■□□□□ 0.23
ClppO88696 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ClppO88696 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ClppO88696 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClppO88696 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.46■□□□□ 0.23
ClppO88696 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.46■□□□□ 0.23
ClppO88696 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Gm22697-201ENSMUST00000175194 63 ntBASIC16.46■□□□□ 0.23
ClppO88696 Gm21362-201ENSMUST00000194272 928 ntBASIC16.46■□□□□ 0.23
ClppO88696 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ClppO88696 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.46■□□□□ 0.23
ClppO88696 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ClppO88696 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClppO88696 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ClppO88696 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
ClppO88696 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ClppO88696 Gm9731-201ENSMUST00000209480 747 ntBASIC16.45■□□□□ 0.22
ClppO88696 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClppO88696 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ClppO88696 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
ClppO88696 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ClppO88696 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.44■□□□□ 0.22
ClppO88696 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ClppO88696 Gm25016-201ENSMUST00000158399 131 ntBASIC16.44■□□□□ 0.22
ClppO88696 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.44■□□□□ 0.22
ClppO88696 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
ClppO88696 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ClppO88696 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ClppO88696 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.44■□□□□ 0.22
ClppO88696 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Gm7791-201ENSMUST00000219066 539 ntBASIC16.43■□□□□ 0.22
ClppO88696 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ClppO88696 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ClppO88696 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ClppO88696 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ClppO88696 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms