Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Gm7729-201ENSMUST00000050143 801 ntBASIC17.7■□□□□ 0.42
Ttc3O88196 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc3O88196 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc3O88196 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.69■□□□□ 0.42
Ttc3O88196 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc3O88196 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc3O88196 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc3O88196 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc3O88196 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ttc3O88196 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.69■□□□□ 0.42
Ttc3O88196 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ttc3O88196 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.69■□□□□ 0.42
Ttc3O88196 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Ttc3O88196 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ttc3O88196 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.68■□□□□ 0.42
Ttc3O88196 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ttc3O88196 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.68■□□□□ 0.42
Ttc3O88196 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ttc3O88196 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Gm24589-201ENSMUST00000116692 94 ntBASIC17.68■□□□□ 0.42
Ttc3O88196 Gm29707-201ENSMUST00000196325 491 ntBASIC17.68■□□□□ 0.42
Ttc3O88196 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ttc3O88196 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc3O88196 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc3O88196 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc3O88196 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc3O88196 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc3O88196 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.67■□□□□ 0.42
Ttc3O88196 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
Ttc3O88196 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ttc3O88196 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc3O88196 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ttc3O88196 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Ttc3O88196 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ttc3O88196 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.66■□□□□ 0.42
Ttc3O88196 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ttc3O88196 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.66■□□□□ 0.42
Ttc3O88196 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ttc3O88196 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ttc3O88196 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ttc3O88196 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Ttc3O88196 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ttc3O88196 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.65■□□□□ 0.42
Ttc3O88196 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.65■□□□□ 0.42
Ttc3O88196 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ttc3O88196 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ttc3O88196 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.64■□□□□ 0.42
Ttc3O88196 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.64■□□□□ 0.41
Ttc3O88196 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ttc3O88196 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Ttc3O88196 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Ttc3O88196 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Ttc3O88196 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.64■□□□□ 0.41
Ttc3O88196 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Ttc3O88196 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc3O88196 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms