Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Nr1i3O35627 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.16■□□□□ 0.5
Nr1i3O35627 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.16■□□□□ 0.5
Nr1i3O35627 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nr1i3O35627 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nr1i3O35627 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nr1i3O35627 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.15■□□□□ 0.5
Nr1i3O35627 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.15■□□□□ 0.5
Nr1i3O35627 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.15■□□□□ 0.5
Nr1i3O35627 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1i3O35627 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nr1i3O35627 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nr1i3O35627 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nr1i3O35627 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.14■□□□□ 0.49
Nr1i3O35627 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Nr1i3O35627 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Nr1i3O35627 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.14■□□□□ 0.49
Nr1i3O35627 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.14■□□□□ 0.49
Nr1i3O35627 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.14■□□□□ 0.49
Nr1i3O35627 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.14■□□□□ 0.49
Nr1i3O35627 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nr1i3O35627 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.14■□□□□ 0.49
Nr1i3O35627 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nr1i3O35627 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1i3O35627 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nr1i3O35627 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.13■□□□□ 0.49
Nr1i3O35627 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.13■□□□□ 0.49
Nr1i3O35627 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.13■□□□□ 0.49
Nr1i3O35627 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.13■□□□□ 0.49
Nr1i3O35627 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nr1i3O35627 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.13■□□□□ 0.49
Nr1i3O35627 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1i3O35627 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.12■□□□□ 0.49
Nr1i3O35627 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.12■□□□□ 0.49
Nr1i3O35627 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms