Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.68■□□□□ 0.26
Slc1a6O35544 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Slc1a6O35544 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc1a6O35544 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.67■□□□□ 0.26
Slc1a6O35544 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc1a6O35544 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Slc1a6O35544 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc1a6O35544 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Slc1a6O35544 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Dio3-201ENSMUST00000097228 1449 ntBASIC16.67■□□□□ 0.26
Slc1a6O35544 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Slc1a6O35544 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc1a6O35544 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a6O35544 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.66■□□□□ 0.26
Slc1a6O35544 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.66■□□□□ 0.26
Slc1a6O35544 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Slc1a6O35544 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.66■□□□□ 0.26
Slc1a6O35544 Gm42569-201ENSMUST00000200539 472 ntBASIC16.66■□□□□ 0.26
Slc1a6O35544 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.66■□□□□ 0.26
Slc1a6O35544 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Slc1a6O35544 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc1a6O35544 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Slc1a6O35544 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a6O35544 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Gm4974-201ENSMUST00000209974 875 ntBASIC16.65■□□□□ 0.26
Slc1a6O35544 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.65■□□□□ 0.26
Slc1a6O35544 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a6O35544 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slc1a6O35544 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.64■□□□□ 0.26
Slc1a6O35544 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slc1a6O35544 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Slc1a6O35544 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc1a6O35544 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.64■□□□□ 0.25
Slc1a6O35544 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc1a6O35544 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a6O35544 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms