Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Gm38285-201ENSMUST00000192928 922 ntBASIC13.23□□□□□ -0.29
Tnfsf11O35235 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Gm10493-201ENSMUST00000097270 612 ntBASIC13.23□□□□□ -0.29
Tnfsf11O35235 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf11O35235 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfsf11O35235 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.21□□□□□ -0.29
Tnfsf11O35235 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.21□□□□□ -0.29
Tnfsf11O35235 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.21□□□□□ -0.29
Tnfsf11O35235 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.21□□□□□ -0.29
Tnfsf11O35235 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf11O35235 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.21□□□□□ -0.3
Tnfsf11O35235 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Tnfsf11O35235 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf11O35235 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms