Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.53■□□□□ 0.4
Ebf3O08791 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ebf3O08791 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.53■□□□□ 0.4
Ebf3O08791 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.53■□□□□ 0.4
Ebf3O08791 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.53■□□□□ 0.4
Ebf3O08791 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ebf3O08791 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ebf3O08791 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.52■□□□□ 0.4
Ebf3O08791 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Gm11950-201ENSMUST00000121615 838 ntBASIC17.52■□□□□ 0.4
Ebf3O08791 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ebf3O08791 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.52■□□□□ 0.4
Ebf3O08791 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ebf3O08791 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf3O08791 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.52■□□□□ 0.4
Ebf3O08791 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf3O08791 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ebf3O08791 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf3O08791 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf3O08791 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf3O08791 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf3O08791 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf3O08791 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf3O08791 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.51■□□□□ 0.39
Ebf3O08791 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.51■□□□□ 0.39
Ebf3O08791 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ebf3O08791 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ebf3O08791 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf3O08791 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ebf3O08791 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.5■□□□□ 0.39
Ebf3O08791 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Ebf3O08791 Gm18669-201ENSMUST00000216049 778 ntBASIC17.5■□□□□ 0.39
Ebf3O08791 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.5■□□□□ 0.39
Ebf3O08791 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.5■□□□□ 0.39
Ebf3O08791 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.5■□□□□ 0.39
Ebf3O08791 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ebf3O08791 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf3O08791 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ebf3O08791 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ebf3O08791 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Actl10-202ENSMUST00000226583 1501 ntBASIC17.49■□□□□ 0.39
Ebf3O08791 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.49■□□□□ 0.39
Ebf3O08791 Gm6623-201ENSMUST00000173570 544 ntBASIC17.49■□□□□ 0.39
Ebf3O08791 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms