Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc180J3QNE4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Gm10060-201ENSMUST00000212002 111 ntBASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Gm42900-201ENSMUST00000197184 2167 ntBASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc180J3QNE4 Gfra2-202ENSMUST00000227633 1480 ntBASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Gm12350-201ENSMUST00000121208 462 ntBASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 Mir5131-201ENSMUST00000175426 93 ntBASIC30.71■■■□□ 2.51
Ccdc180J3QNE4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Ccdc180J3QNE4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Ccdc180J3QNE4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC30.7■■■□□ 2.51
Ccdc180J3QNE4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC30.7■■■□□ 2.51
Ccdc180J3QNE4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Ccdc180J3QNE4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Ccdc180J3QNE4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC30.7■■■□□ 2.5
Ccdc180J3QNE4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC30.7■■■□□ 2.5
Ccdc180J3QNE4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Ccdc180J3QNE4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Gm6296-201ENSMUST00000222599 943 ntBASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Gm32996-201ENSMUST00000199828 1447 ntBASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Ccdc180J3QNE4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Gm7230-201ENSMUST00000173026 815 ntBASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc180J3QNE4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Gm25990-201ENSMUST00000102440 86 ntBASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc180J3QNE4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc180J3QNE4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms