Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm1E9Q9Q2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm1E9Q9Q2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Gm11452-201ENSMUST00000122376 690 ntBASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Gm18733-201ENSMUST00000173950 856 ntBASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm1E9Q9Q2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3hdm1E9Q9Q2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3hdm1E9Q9Q2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
R3hdm1E9Q9Q2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
R3hdm1E9Q9Q2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Gm10418-201ENSMUST00000100943 576 ntBASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Gm37935-201ENSMUST00000192012 982 ntBASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm1E9Q9Q2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm1E9Q9Q2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms