Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gm11425-201ENSMUST00000119608 498 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gm9396-201ENSMUST00000076703 567 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gm7856-201ENSMUST00000117514 1493 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gm27301-201ENSMUST00000184012 127 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 Gm27989-201ENSMUST00000184721 107 ntBASIC9.48□□□□□ -0.89
Herc1E9PZP8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc1E9PZP8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Phf7-203ENSMUST00000226565 1971 ntBASIC9.47□□□□□ -0.89
Herc1E9PZP8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm18421-201ENSMUST00000204122 625 ntBASIC9.47□□□□□ -0.89
Herc1E9PZP8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm25745-201ENSMUST00000174945 133 ntBASIC9.47□□□□□ -0.89
Herc1E9PZP8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc1E9PZP8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Herc1E9PZP8 Gm11745-201ENSMUST00000121669 448 ntBASIC9.46□□□□□ -0.89
Herc1E9PZP8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc1E9PZP8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.46□□□□□ -0.89
Herc1E9PZP8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Herc1E9PZP8 Gm12176-201ENSMUST00000121420 875 ntBASIC9.46□□□□□ -0.9
Herc1E9PZP8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.46□□□□□ -0.9
Herc1E9PZP8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Herc1E9PZP8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc1E9PZP8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Herc1E9PZP8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC9.45□□□□□ -0.9
Herc1E9PZP8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Herc1E9PZP8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc1E9PZP8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms