Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28043E0CXC2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.96■□□□□ 0.31
Gm28043E0CXC2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Gm28043E0CXC2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.96■□□□□ 0.3
Gm28043E0CXC2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm28043E0CXC2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Gm11643-201ENSMUST00000119578 864 ntBASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28043E0CXC2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Gm27011-201ENSMUST00000182352 972 ntBASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms