Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30cD3YVI9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30cD3YVI9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim30cD3YVI9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30cD3YVI9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30cD3YVI9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30cD3YVI9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Gm43183-201ENSMUST00000200632 547 ntBASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim30cD3YVI9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim30cD3YVI9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trim30cD3YVI9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.46■□□□□ 0.54
Trim30cD3YVI9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Mir1199-201ENSMUST00000117015 119 ntBASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Trim30cD3YVI9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Gm37292-201ENSMUST00000192062 758 ntBASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.44■□□□□ 0.54
Trim30cD3YVI9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim30cD3YVI9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms