Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col4a6B1AVK5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.38■□□□□ 0.37
Col4a6B1AVK5 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.37■□□□□ 0.37
Col4a6B1AVK5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.37■□□□□ 0.37
Col4a6B1AVK5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Gm7063-201ENSMUST00000186840 981 ntBASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Psmb5-202ENSMUST00000227257 622 ntBASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a6B1AVK5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Gm4535-201ENSMUST00000182274 558 ntBASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Gm10355-201ENSMUST00000097146 517 ntBASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a6B1AVK5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm13418-201ENSMUST00000119097 944 ntBASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms