Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scn1aA2APX8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn1aA2APX8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn1aA2APX8 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.71■□□□□ 0.43
Scn1aA2APX8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Scn1aA2APX8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn1aA2APX8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn1aA2APX8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn1aA2APX8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.7■□□□□ 0.42
Scn1aA2APX8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn1aA2APX8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn1aA2APX8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.7■□□□□ 0.42
Scn1aA2APX8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn1aA2APX8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Olfr129-201ENSMUST00000122318 993 ntBASIC17.69■□□□□ 0.42
Scn1aA2APX8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.69■□□□□ 0.42
Scn1aA2APX8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn1aA2APX8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn1aA2APX8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.67■□□□□ 0.42
Scn1aA2APX8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scn1aA2APX8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn1aA2APX8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms