Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv17A0A140T8P8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv17A0A140T8P8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv17A0A140T8P8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv17A0A140T8P8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv17A0A140T8P8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv17A0A140T8P8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms