Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Gm13216-201ENSMUST00000117145 591 ntBASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Gm7291-201ENSMUST00000199147 382 ntBASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Gm18671-201ENSMUST00000214826 683 ntBASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav11A0A0B4J1J9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Gm10033-202ENSMUST00000211874 928 ntBASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav11A0A0B4J1J9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav11A0A0B4J1J9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav11A0A0B4J1J9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav11A0A0B4J1J9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav11A0A0B4J1J9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms