Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Gm13148-201ENSMUST00000118892 745 ntBASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Gm5408-201ENSMUST00000197998 747 ntBASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trbv1A0A0B4J1G7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Gm26524-201ENSMUST00000192339 390 ntBASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Rab3c-203ENSMUST00000224180 967 ntBASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv1A0A0B4J1G7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv1A0A0B4J1G7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv1A0A0B4J1G7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv1A0A0B4J1G7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.27□□□□□ -0.28
Trbv1A0A0B4J1G7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv1A0A0B4J1G7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv1A0A0B4J1G7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms