Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-1A0A075B644 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav13-1A0A075B644 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Gm7638-201ENSMUST00000121348 967 ntBASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Trav13-1A0A075B644 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav13-1A0A075B644 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Mir5130-201ENSMUST00000175160 84 ntBASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Gm37025-201ENSMUST00000195159 829 ntBASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms