Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv4A0A075B5I2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv4A0A075B5I2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv4A0A075B5I2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv4A0A075B5I2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Gm27463-201ENSMUST00000183569 57 ntBASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv4A0A075B5I2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv4A0A075B5I2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv4A0A075B5I2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms