Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm25230-201ENSMUST00000179740 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm26434-201ENSMUST00000179778 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25741-201ENSMUST00000179825 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24759-201ENSMUST00000179827 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24219-201ENSMUST00000179861 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm23410-201ENSMUST00000179967 107 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22756-201ENSMUST00000180118 107 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm44385-201ENSMUST00000198781 81 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm26438-201ENSMUST00000082593 107 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22505-201ENSMUST00000082956 108 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22363-201ENSMUST00000083100 108 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm23814-201ENSMUST00000083230 102 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm23095-201ENSMUST00000083446 107 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm23254-201ENSMUST00000097244 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25274-201ENSMUST00000104296 135 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 Gm22406-201ENSMUST00000174923 93 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 Gm25952-201ENSMUST00000175329 74 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 Gm27980-201ENSMUST00000184094 169 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 AC140930.2-201ENSMUST00000221803 109 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 Gm24202-201ENSMUST00000082948 103 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 Gm26054-201ENSMUST00000083037 107 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 Gm24492-201ENSMUST00000083798 107 ntBASIC0,08□□□□□ -2,4
H2afb1S4R1E0 Gm25756-201ENSMUST00000103990 136 ntBASIC0,07□□□□□ -2,4
H2afb1S4R1E0 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC0,07□□□□□ -2,4
H2afb1S4R1E0 Mir3967-201ENSMUST00000198710 68 ntBASIC0,07□□□□□ -2,4
H2afb1S4R1E0 Gm22720-201ENSMUST00000122710 87 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 Gm22100-201ENSMUST00000157926 63 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 Gm24884-201ENSMUST00000158784 119 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 Mir8107-201ENSMUST00000184024 117 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 Mir6394-201ENSMUST00000184738 99 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 Gm37796-201ENSMUST00000195327 134 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 Gm44458-201ENSMUST00000196594 143 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 Mir224-201ENSMUST00000083608 82 ntBASIC0,06□□□□□ -2,4
H2afb1S4R1E0 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0,05□□□□□ -2,4
H2afb1S4R1E0 Gm25328-201ENSMUST00000175013 107 ntBASIC0,05□□□□□ -2,4
H2afb1S4R1E0 Gm44345-201ENSMUST00000199560 135 ntBASIC0,05□□□□□ -2,4
H2afb1S4R1E0 AC166341.8-201ENSMUST00000221267 108 ntBASIC0,05□□□□□ -2,4
H2afb1S4R1E0 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0,04□□□□□ -2,4
H2afb1S4R1E0 Gm25753-201ENSMUST00000116792 121 ntBASIC0,04□□□□□ -2,4
H2afb1S4R1E0 Gm26253-201ENSMUST00000122493 103 ntBASIC0,04□□□□□ -2,4
H2afb1S4R1E0 AC132833.2-201ENSMUST00000228699 157 ntBASIC0,04□□□□□ -2,4
H2afb1S4R1E0 Gm25791-201ENSMUST00000083292 137 ntBASIC0,04□□□□□ -2,4
H2afb1S4R1E0 Gm25678-201ENSMUST00000174984 73 ntBASIC0,03□□□□□ -2,4
H2afb1S4R1E0 Gm25993-201ENSMUST00000175391 80 ntBASIC0,03□□□□□ -2,4
H2afb1S4R1E0 Gm45617-201ENSMUST00000211132 209 ntBASIC0,03□□□□□ -2,4
H2afb1S4R1E0 AC125190.3-201ENSMUST00000223224 121 ntBASIC0,03□□□□□ -2,4
H2afb1S4R1E0 Gm24148-201ENSMUST00000082762 80 ntBASIC0,03□□□□□ -2,4
H2afb1S4R1E0 Gm22672-201ENSMUST00000104414 134 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm25309-201ENSMUST00000116728 126 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Mir669h-201ENSMUST00000116944 125 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm23788-201ENSMUST00000122535 106 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm24384-201ENSMUST00000122693 75 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm24288-201ENSMUST00000157630 144 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm23761-201ENSMUST00000158347 104 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm22770-201ENSMUST00000158368 67 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm22140-201ENSMUST00000158745 120 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Mir6985-201ENSMUST00000184641 61 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm26456-201ENSMUST00000082831 111 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 n-R5s12-201ENSMUST00000083785 119 ntBASIC0,02□□□□□ -2,41
H2afb1S4R1E0 Gm25160-201ENSMUST00000158914 102 ntBASIC0,01□□□□□ -2,41
H2afb1S4R1E0 Gm25296-201ENSMUST00000082566 67 ntBASIC0,01□□□□□ -2,41
H2afb1S4R1E0 Gm25703-201ENSMUST00000083123 151 ntBASIC0,01□□□□□ -2,41
H2afb1S4R1E0 Gm22368-201ENSMUST00000102416 109 ntBASIC0□□□□□ -2,41
H2afb1S4R1E0 Gm23261-201ENSMUST00000158316 136 ntBASIC-0,01□□□□□ -2,41
H2afb1S4R1E0 Gm37750-201ENSMUST00000193563 129 ntBASIC-0,01□□□□□ -2,41
H2afb1S4R1E0 Snord85-201ENSMUST00000083262 73 ntBASIC-0,01□□□□□ -2,41
H2afb1S4R1E0 Gm22542-201ENSMUST00000158166 95 ntBASIC-0,02□□□□□ -2,41
H2afb1S4R1E0 Gm25656-201ENSMUST00000158466 66 ntBASIC-0,02□□□□□ -2,41
H2afb1S4R1E0 Gm25307-201ENSMUST00000158885 106 ntBASIC-0,02□□□□□ -2,41
H2afb1S4R1E0 Gm23159-201ENSMUST00000175088 77 ntBASIC-0,02□□□□□ -2,41
H2afb1S4R1E0 mt-Tf-201ENSMUST00000082387 68 ntBASIC-0,02□□□□□ -2,41
H2afb1S4R1E0 Gm22213-201ENSMUST00000157564 119 ntBASIC-0,03□□□□□ -2,41
H2afb1S4R1E0 Mir7077-201ENSMUST00000183991 57 ntBASIC-0,03□□□□□ -2,41
H2afb1S4R1E0 Gm23528-201ENSMUST00000104571 132 ntBASIC-0,04□□□□□ -2,42
H2afb1S4R1E0 Gm24379-201ENSMUST00000122695 86 ntBASIC-0,04□□□□□ -2,42
H2afb1S4R1E0 Gm22327-201ENSMUST00000158899 108 ntBASIC-0,04□□□□□ -2,42
H2afb1S4R1E0 Gm24801-201ENSMUST00000178503 105 ntBASIC-0,04□□□□□ -2,42
H2afb1S4R1E0 Gm25815-201ENSMUST00000082755 107 ntBASIC-0,04□□□□□ -2,42
H2afb1S4R1E0 Mir344-201ENSMUST00000083634 95 ntBASIC-0,04□□□□□ -2,42
H2afb1S4R1E0 Gm22828-201ENSMUST00000083768 107 ntBASIC-0,04□□□□□ -2,42
H2afb1S4R1E0 Gm14533-201ENSMUST00000117088 93 ntBASIC-0,05□□□□□ -2,42
H2afb1S4R1E0 Gm25622-201ENSMUST00000157217 104 ntBASIC-0,05□□□□□ -2,42
H2afb1S4R1E0 Gm22838-201ENSMUST00000158437 99 ntBASIC-0,05□□□□□ -2,42
H2afb1S4R1E0 Gm29432-201ENSMUST00000185397 139 ntBASIC-0,05□□□□□ -2,42
H2afb1S4R1E0 Mir3065-201ENSMUST00000198674 87 ntBASIC-0,05□□□□□ -2,42
H2afb1S4R1E0 Gm24234-201ENSMUST00000104316 107 ntBASIC-0,06□□□□□ -2,42
H2afb1S4R1E0 Gm26379-202ENSMUST00000200225 132 ntBASIC-0,06□□□□□ -2,42
H2afb1S4R1E0 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-0,07□□□□□ -2,42
H2afb1S4R1E0 Gm22077-201ENSMUST00000157594 93 ntBASIC-0,07□□□□□ -2,42
H2afb1S4R1E0 Gm24877-201ENSMUST00000158779 116 ntBASIC-0,07□□□□□ -2,42
H2afb1S4R1E0 Gm27686-201ENSMUST00000185123 91 ntBASIC-0,07□□□□□ -2,42
H2afb1S4R1E0 Gm20108-201ENSMUST00000219977 153 ntBASIC-0,07□□□□□ -2,42
H2afb1S4R1E0 Gm24099-201ENSMUST00000083384 107 ntBASIC-0,07□□□□□ -2,42
H2afb1S4R1E0 Gm26081-201ENSMUST00000104068 132 ntBASIC-0,08□□□□□ -2,42
H2afb1S4R1E0 Gm23126-201ENSMUST00000104260 134 ntBASIC-0,08□□□□□ -2,42
H2afb1S4R1E0 Mir1197-201ENSMUST00000117037 120 ntBASIC-0,08□□□□□ -2,42
H2afb1S4R1E0 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0,08□□□□□ -2,42
H2afb1S4R1E0 Gm22004-201ENSMUST00000101884 107 ntBASIC-0,09□□□□□ -2,42
H2afb1S4R1E0 Gm24580-201ENSMUST00000103965 131 ntBASIC-0,09□□□□□ -2,42
H2afb1S4R1E0 Gm25449-201ENSMUST00000179389 79 ntBASIC-0,09□□□□□ -2,42
Retrieved 100 of 76,532 protein–RNA pairs in 128,4 ms