Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Mir377-201ENSMUST00000083504 68 ntBASIC2.23□□□□□ -2.05
Lhx6Q9R1R0 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Lhx6Q9R1R0 Mir301b-201ENSMUST00000102333 97 ntBASIC2.22□□□□□ -2.05
Lhx6Q9R1R0 Gm25309-201ENSMUST00000116728 126 ntBASIC2.22□□□□□ -2.05
Lhx6Q9R1R0 Gm23033-201ENSMUST00000157996 134 ntBASIC2.22□□□□□ -2.05
Lhx6Q9R1R0 Mir7675-201ENSMUST00000184262 58 ntBASIC2.22□□□□□ -2.05
Lhx6Q9R1R0 Mir497-201ENSMUST00000200557 84 ntBASIC2.22□□□□□ -2.05
Lhx6Q9R1R0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Lhx6Q9R1R0 Gm26052-201ENSMUST00000104646 84 ntBASIC2.21□□□□□ -2.06
Lhx6Q9R1R0 Gm25663-201ENSMUST00000157698 135 ntBASIC2.21□□□□□ -2.06
Lhx6Q9R1R0 Gm25326-201ENSMUST00000101903 107 ntBASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Gm14533-201ENSMUST00000117088 93 ntBASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Gm23172-201ENSMUST00000157160 124 ntBASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Mir669n-201ENSMUST00000158636 54 ntBASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Gm22466-201ENSMUST00000175278 69 ntBASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Gm22652-201ENSMUST00000083207 131 ntBASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Mir324-201ENSMUST00000083600 89 ntBASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2.2□□□□□ -2.06
Lhx6Q9R1R0 Gm23708-201ENSMUST00000104367 123 ntBASIC2.19□□□□□ -2.06
Lhx6Q9R1R0 Gm23600-201ENSMUST00000157260 71 ntBASIC2.19□□□□□ -2.06
Lhx6Q9R1R0 Gm24288-201ENSMUST00000157630 144 ntBASIC2.19□□□□□ -2.06
Lhx6Q9R1R0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Lhx6Q9R1R0 Gm24394-201ENSMUST00000158141 123 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Gm25656-201ENSMUST00000158466 66 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Gm23339-201ENSMUST00000158962 139 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Gm23410-201ENSMUST00000179967 107 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Mir6342-201ENSMUST00000183870 125 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 CT025630.1-201ENSMUST00000227901 172 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Gm22505-201ENSMUST00000082956 108 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Gm22363-201ENSMUST00000083100 108 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Gm23814-201ENSMUST00000083230 102 ntBASIC2.18□□□□□ -2.06
Lhx6Q9R1R0 Gm27717-201ENSMUST00000183933 151 ntBASIC2.17□□□□□ -2.06
Lhx6Q9R1R0 Gm25796-201ENSMUST00000082645 163 ntBASIC2.17□□□□□ -2.06
Lhx6Q9R1R0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Lhx6Q9R1R0 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Lhx6Q9R1R0 Snord69-201ENSMUST00000104024 80 ntBASIC2.16□□□□□ -2.06
Lhx6Q9R1R0 Gm26274-201ENSMUST00000157103 321 ntBASIC2.16□□□□□ -2.06
Lhx6Q9R1R0 Gm26038-201ENSMUST00000158151 106 ntBASIC2.16□□□□□ -2.06
Lhx6Q9R1R0 Gm23967-201ENSMUST00000175062 78 ntBASIC2.16□□□□□ -2.06
Lhx6Q9R1R0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Lhx6Q9R1R0 Gm16510-201ENSMUST00000153501 249 ntBASIC2.15□□□□□ -2.07
Lhx6Q9R1R0 Mir100-201ENSMUST00000175270 80 ntBASIC2.15□□□□□ -2.07
Lhx6Q9R1R0 Mir1949-202ENSMUST00000199259 70 ntBASIC2.15□□□□□ -2.07
Lhx6Q9R1R0 AC113441.1-201ENSMUST00000223464 134 ntBASIC2.15□□□□□ -2.07
Lhx6Q9R1R0 Gm25274-201ENSMUST00000104296 135 ntBASIC2.14□□□□□ -2.07
Lhx6Q9R1R0 Gm23109-201ENSMUST00000116867 126 ntBASIC2.14□□□□□ -2.07
Lhx6Q9R1R0 Gm13065-201ENSMUST00000119178 141 ntBASIC2.14□□□□□ -2.07
Lhx6Q9R1R0 Gm24549-201ENSMUST00000158647 139 ntBASIC2.14□□□□□ -2.07
Lhx6Q9R1R0 Gm23573-201ENSMUST00000104408 107 ntBASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 Gm22165-201ENSMUST00000158414 103 ntBASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 Gm38274-201ENSMUST00000195689 148 ntBASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 Mir30a-201ENSMUST00000083471 71 ntBASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 Mir423-201ENSMUST00000083584 109 ntBASIC2.13□□□□□ -2.07
Lhx6Q9R1R0 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.12□□□□□ -2.07
Lhx6Q9R1R0 Gm25055-201ENSMUST00000157369 76 ntBASIC2.12□□□□□ -2.07
Lhx6Q9R1R0 Gm26181-201ENSMUST00000157687 106 ntBASIC2.12□□□□□ -2.07
Lhx6Q9R1R0 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Lhx6Q9R1R0 Gm45125-201ENSMUST00000206908 151 ntBASIC2.12□□□□□ -2.07
Lhx6Q9R1R0 Mir717-201ENSMUST00000102259 109 ntBASIC2.11□□□□□ -2.07
Lhx6Q9R1R0 Gm25170-201ENSMUST00000104191 129 ntBASIC2.11□□□□□ -2.07
Lhx6Q9R1R0 Gm24297-201ENSMUST00000158300 68 ntBASIC2.11□□□□□ -2.07
Lhx6Q9R1R0 Mir448-201ENSMUST00000083516 112 ntBASIC2.11□□□□□ -2.07
Lhx6Q9R1R0 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Lhx6Q9R1R0 Gm22431-201ENSMUST00000158545 107 ntBASIC2.1□□□□□ -2.07
Lhx6Q9R1R0 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.1□□□□□ -2.07
Lhx6Q9R1R0 Gm23483-201ENSMUST00000104179 108 ntBASIC2.09□□□□□ -2.07
Lhx6Q9R1R0 Gm44396-201ENSMUST00000199843 114 ntBASIC2.09□□□□□ -2.07
Lhx6Q9R1R0 Gm44211-201ENSMUST00000204867 145 ntBASIC2.09□□□□□ -2.07
Lhx6Q9R1R0 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.09□□□□□ -2.07
Lhx6Q9R1R0 Gm26082-201ENSMUST00000104070 127 ntBASIC2.08□□□□□ -2.08
Lhx6Q9R1R0 Gm22593-201ENSMUST00000104245 109 ntBASIC2.08□□□□□ -2.08
Lhx6Q9R1R0 Gm24233-201ENSMUST00000104317 122 ntBASIC2.08□□□□□ -2.08
Lhx6Q9R1R0 Gm25035-201ENSMUST00000175414 77 ntBASIC2.08□□□□□ -2.08
Lhx6Q9R1R0 Gm27326-201ENSMUST00000183504 95 ntBASIC2.08□□□□□ -2.08
Lhx6Q9R1R0 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Lhx6Q9R1R0 Gm25832-201ENSMUST00000104140 130 ntBASIC2.07□□□□□ -2.08
Lhx6Q9R1R0 Gm25658-201ENSMUST00000158472 128 ntBASIC2.07□□□□□ -2.08
Lhx6Q9R1R0 Mir7232-201ENSMUST00000197929 74 ntBASIC2.07□□□□□ -2.08
Lhx6Q9R1R0 Mir223-201ENSMUST00000102112 110 ntBASIC2.06□□□□□ -2.08
Lhx6Q9R1R0 Gm26154-201ENSMUST00000102339 96 ntBASIC2.06□□□□□ -2.08
Lhx6Q9R1R0 Gm24342-201ENSMUST00000103907 104 ntBASIC2.06□□□□□ -2.08
Lhx6Q9R1R0 Gm22785-201ENSMUST00000104087 132 ntBASIC2.05□□□□□ -2.08
Lhx6Q9R1R0 Mir3968-201ENSMUST00000175355 100 ntBASIC2.05□□□□□ -2.08
Lhx6Q9R1R0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC2.05□□□□□ -2.08
Lhx6Q9R1R0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.05□□□□□ -2.08
Lhx6Q9R1R0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Lhx6Q9R1R0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Lhx6Q9R1R0 Gm23130-201ENSMUST00000104252 74 ntBASIC2.04□□□□□ -2.08
Lhx6Q9R1R0 Gm22302-201ENSMUST00000082657 106 ntBASIC2.04□□□□□ -2.08
Lhx6Q9R1R0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Lhx6Q9R1R0 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.03□□□□□ -2.08
Lhx6Q9R1R0 Gm37557-201ENSMUST00000191640 139 ntBASIC2.03□□□□□ -2.08
Lhx6Q9R1R0 Gm43911-201ENSMUST00000203097 76 ntBASIC2.03□□□□□ -2.08
Lhx6Q9R1R0 Gm22357-201ENSMUST00000082882 83 ntBASIC2.03□□□□□ -2.08
Lhx6Q9R1R0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Lhx6Q9R1R0 Gm22164-201ENSMUST00000158413 106 ntBASIC2.02□□□□□ -2.09
Lhx6Q9R1R0 Gm25768-201ENSMUST00000158570 98 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 161.5 ms