Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm23122-201ENSMUST00000157645 103 ntBASIC1,5□□□□□ -2,17
Prpf40aQ9R1C7 Gm23500-201ENSMUST00000157735 98 ntBASIC1,5□□□□□ -2,17
Prpf40aQ9R1C7 Gm23416-201ENSMUST00000175520 95 ntBASIC1,5□□□□□ -2,17
Prpf40aQ9R1C7 Gm27326-201ENSMUST00000183504 95 ntBASIC1,5□□□□□ -2,17
Prpf40aQ9R1C7 Gm27711-201ENSMUST00000183802 118 ntBASIC1,5□□□□□ -2,17
Prpf40aQ9R1C7 Gm28794-201ENSMUST00000185276 136 ntBASIC1,5□□□□□ -2,17
Prpf40aQ9R1C7 Gm23570-201ENSMUST00000083029 104 ntBASIC1,5□□□□□ -2,17
Prpf40aQ9R1C7 Gm11857-201ENSMUST00000119817 324 ntBASIC1,49□□□□□ -2,17
Prpf40aQ9R1C7 Gm25160-201ENSMUST00000158914 102 ntBASIC1,49□□□□□ -2,17
Prpf40aQ9R1C7 Mir15a-201ENSMUST00000175266 84 ntBASIC1,49□□□□□ -2,17
Prpf40aQ9R1C7 Gm44483-201ENSMUST00000197203 97 ntBASIC1,49□□□□□ -2,17
Prpf40aQ9R1C7 Gm25619-201ENSMUST00000122621 104 ntBASIC1,48□□□□□ -2,17
Prpf40aQ9R1C7 Gm24500-201ENSMUST00000158447 124 ntBASIC1,48□□□□□ -2,17
Prpf40aQ9R1C7 Gm44211-201ENSMUST00000204867 145 ntBASIC1,48□□□□□ -2,17
Prpf40aQ9R1C7 Gm23245-201ENSMUST00000083370 135 ntBASIC1,48□□□□□ -2,17
Prpf40aQ9R1C7 Gm11333-201ENSMUST00000119479 148 ntBASIC1,47□□□□□ -2,17
Prpf40aQ9R1C7 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1,47□□□□□ -2,17
Prpf40aQ9R1C7 Gm24233-201ENSMUST00000104317 122 ntBASIC1,46□□□□□ -2,18
Prpf40aQ9R1C7 Gm23708-201ENSMUST00000104367 123 ntBASIC1,46□□□□□ -2,18
Prpf40aQ9R1C7 Mir101a-201ENSMUST00000083517 83 ntBASIC1,46□□□□□ -2,18
Prpf40aQ9R1C7 Gm22663-201ENSMUST00000158721 102 ntBASIC1,45□□□□□ -2,18
Prpf40aQ9R1C7 Gm26359-201ENSMUST00000158873 101 ntBASIC1,45□□□□□ -2,18
Prpf40aQ9R1C7 Mir7010-201ENSMUST00000183464 63 ntBASIC1,45□□□□□ -2,18
Prpf40aQ9R1C7 Gm43911-201ENSMUST00000203097 76 ntBASIC1,45□□□□□ -2,18
Prpf40aQ9R1C7 Gm25964-201ENSMUST00000157171 97 ntBASIC1,44□□□□□ -2,18
Prpf40aQ9R1C7 Gm25138-201ENSMUST00000083248 136 ntBASIC1,44□□□□□ -2,18
Prpf40aQ9R1C7 Gm23203-201ENSMUST00000104374 107 ntBASIC1,43□□□□□ -2,18
Prpf40aQ9R1C7 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,43□□□□□ -2,18
Prpf40aQ9R1C7 Gm22203-201ENSMUST00000158605 58 ntBASIC1,43□□□□□ -2,18
Prpf40aQ9R1C7 Gm26029-201ENSMUST00000158659 132 ntBASIC1,43□□□□□ -2,18
Prpf40aQ9R1C7 Mir6962-201ENSMUST00000199512 63 ntBASIC1,43□□□□□ -2,18
Prpf40aQ9R1C7 Gm23336-201ENSMUST00000117023 123 ntBASIC1,42□□□□□ -2,18
Prpf40aQ9R1C7 Mir1197-201ENSMUST00000117037 120 ntBASIC1,42□□□□□ -2,18
Prpf40aQ9R1C7 Gm22520-201ENSMUST00000158269 129 ntBASIC1,42□□□□□ -2,18
Prpf40aQ9R1C7 Gm25300-201ENSMUST00000175284 84 ntBASIC1,42□□□□□ -2,18
Prpf40aQ9R1C7 Gm23376-201ENSMUST00000082938 160 ntBASIC1,42□□□□□ -2,18
Prpf40aQ9R1C7 Gm22074-201ENSMUST00000158595 113 ntBASIC1,41□□□□□ -2,18
Prpf40aQ9R1C7 Mir7665-201ENSMUST00000184907 63 ntBASIC1,41□□□□□ -2,18
Prpf40aQ9R1C7 Gm26082-201ENSMUST00000104070 127 ntBASIC1,4□□□□□ -2,19
Prpf40aQ9R1C7 AC158537.2-201ENSMUST00000223575 150 ntBASIC1,4□□□□□ -2,19
Prpf40aQ9R1C7 Gm23012-201ENSMUST00000104149 83 ntBASIC1,39□□□□□ -2,19
Prpf40aQ9R1C7 Gm22149-201ENSMUST00000104442 136 ntBASIC1,39□□□□□ -2,19
Prpf40aQ9R1C7 Gm22413-201ENSMUST00000175465 85 ntBASIC1,39□□□□□ -2,19
Prpf40aQ9R1C7 Mir6240-201ENSMUST00000184281 117 ntBASIC1,39□□□□□ -2,19
Prpf40aQ9R1C7 Mir33-201ENSMUST00000083531 69 ntBASIC1,39□□□□□ -2,19
Prpf40aQ9R1C7 Gm23761-201ENSMUST00000158347 104 ntBASIC1,38□□□□□ -2,19
Prpf40aQ9R1C7 Gm24865-201ENSMUST00000103246 96 ntBASIC1,37□□□□□ -2,19
Prpf40aQ9R1C7 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,37□□□□□ -2,19
Prpf40aQ9R1C7 Gm27974-201ENSMUST00000183415 105 ntBASIC1,37□□□□□ -2,19
Prpf40aQ9R1C7 Mir211-201ENSMUST00000083651 106 ntBASIC1,37□□□□□ -2,19
Prpf40aQ9R1C7 Gm23237-201ENSMUST00000104639 92 ntBASIC1,36□□□□□ -2,19
Prpf40aQ9R1C7 Gm24379-201ENSMUST00000122695 86 ntBASIC1,36□□□□□ -2,19
Prpf40aQ9R1C7 Gm23306-201ENSMUST00000179058 105 ntBASIC1,36□□□□□ -2,19
Prpf40aQ9R1C7 Gm24134-201ENSMUST00000083361 71 ntBASIC1,36□□□□□ -2,19
Prpf40aQ9R1C7 DQ267101-201ENSMUST00000082562 73 ntBASIC1,35□□□□□ -2,19
Prpf40aQ9R1C7 Snord95-201ENSMUST00000082846 68 ntBASIC1,35□□□□□ -2,19
Prpf40aQ9R1C7 Gm25756-201ENSMUST00000103990 136 ntBASIC1,34□□□□□ -2,19
Prpf40aQ9R1C7 Gm24942-201ENSMUST00000158328 114 ntBASIC1,34□□□□□ -2,19
Prpf40aQ9R1C7 Gm27894-201ENSMUST00000184177 92 ntBASIC1,34□□□□□ -2,19
Prpf40aQ9R1C7 Mir343-201ENSMUST00000102360 75 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Gm22485-201ENSMUST00000157990 109 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Gm22095-201ENSMUST00000158984 150 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Gm25328-201ENSMUST00000175013 107 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Gm24154-201ENSMUST00000175261 130 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Mir3968-201ENSMUST00000175355 100 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Mir3098-201ENSMUST00000175416 87 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Mir126a-201ENSMUST00000083606 73 ntBASIC1,33□□□□□ -2,2
Prpf40aQ9R1C7 Gm24580-201ENSMUST00000103965 131 ntBASIC1,32□□□□□ -2,2
Prpf40aQ9R1C7 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,32□□□□□ -2,2
Prpf40aQ9R1C7 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1,32□□□□□ -2,2
Prpf40aQ9R1C7 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,31□□□□□ -2,2
Prpf40aQ9R1C7 Gm23329-201ENSMUST00000157415 108 ntBASIC1,31□□□□□ -2,2
Prpf40aQ9R1C7 Mir7063-201ENSMUST00000184158 91 ntBASIC1,31□□□□□ -2,2
Prpf40aQ9R1C7 Gm29432-201ENSMUST00000185397 139 ntBASIC1,31□□□□□ -2,2
Prpf40aQ9R1C7 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1,31□□□□□ -2,2
Prpf40aQ9R1C7 Snord32a-201ENSMUST00000083285 83 ntBASIC1,31□□□□□ -2,2
Prpf40aQ9R1C7 Mir669h-201ENSMUST00000116944 125 ntBASIC1,3□□□□□ -2,2
Prpf40aQ9R1C7 Mir7059-201ENSMUST00000184825 59 ntBASIC1,3□□□□□ -2,2
Prpf40aQ9R1C7 Gm20305-201ENSMUST00000193226 177 ntBASIC1,3□□□□□ -2,2
Prpf40aQ9R1C7 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,3□□□□□ -2,2
Prpf40aQ9R1C7 Mir741-201ENSMUST00000103931 71 ntBASIC1,29□□□□□ -2,2
Prpf40aQ9R1C7 Gm24321-201ENSMUST00000175348 80 ntBASIC1,29□□□□□ -2,2
Prpf40aQ9R1C7 Gm27943-201ENSMUST00000184844 116 ntBASIC1,29□□□□□ -2,2
Prpf40aQ9R1C7 Gm22980-201ENSMUST00000082608 70 ntBASIC1,29□□□□□ -2,2
Prpf40aQ9R1C7 Gm26363-201ENSMUST00000158866 83 ntBASIC1,28□□□□□ -2,2
Prpf40aQ9R1C7 Gm24252-201ENSMUST00000083700 132 ntBASIC1,28□□□□□ -2,2
Prpf40aQ9R1C7 Mir3108-201ENSMUST00000175500 79 ntBASIC1,27□□□□□ -2,21
Prpf40aQ9R1C7 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm22780-201ENSMUST00000104084 132 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Mir1904-201ENSMUST00000122702 80 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm25656-201ENSMUST00000158466 66 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm23726-201ENSMUST00000178937 67 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm27549-201ENSMUST00000183508 62 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm45655-201ENSMUST00000211625 160 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm24918-201ENSMUST00000083022 130 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm25894-201ENSMUST00000083458 75 ntBASIC1,26□□□□□ -2,21
Prpf40aQ9R1C7 Gm22673-201ENSMUST00000104415 131 ntBASIC1,25□□□□□ -2,21
Prpf40aQ9R1C7 Gm23328-201ENSMUST00000157418 132 ntBASIC1,25□□□□□ -2,21
Prpf40aQ9R1C7 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,25□□□□□ -2,21
Prpf40aQ9R1C7 Mir8119-201ENSMUST00000183371 129 ntBASIC1,25□□□□□ -2,21
Retrieved 100 of 76,532 protein–RNA pairs in 10,5 ms