Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.73□□□□□ -2.13
Limd1Q9QXD8 Gm25128-201ENSMUST00000083339 76 ntBASIC1.73□□□□□ -2.13
Limd1Q9QXD8 Gm23336-201ENSMUST00000117023 123 ntBASIC1.72□□□□□ -2.13
Limd1Q9QXD8 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Limd1Q9QXD8 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Limd1Q9QXD8 Mir741-201ENSMUST00000103931 71 ntBASIC1.71□□□□□ -2.14
Limd1Q9QXD8 Gm23558-201ENSMUST00000157823 80 ntBASIC1.71□□□□□ -2.14
Limd1Q9QXD8 Gm23853-201ENSMUST00000158375 104 ntBASIC1.71□□□□□ -2.14
Limd1Q9QXD8 Mir3079-201ENSMUST00000175428 90 ntBASIC1.7□□□□□ -2.14
Limd1Q9QXD8 Gm23708-201ENSMUST00000104367 123 ntBASIC1.69□□□□□ -2.14
Limd1Q9QXD8 Gm23989-201ENSMUST00000117030 66 ntBASIC1.69□□□□□ -2.14
Limd1Q9QXD8 Gm22233-201ENSMUST00000157464 114 ntBASIC1.69□□□□□ -2.14
Limd1Q9QXD8 Gm23122-201ENSMUST00000157645 103 ntBASIC1.69□□□□□ -2.14
Limd1Q9QXD8 Gm25868-201ENSMUST00000158253 114 ntBASIC1.69□□□□□ -2.14
Limd1Q9QXD8 Gm27326-201ENSMUST00000183504 95 ntBASIC1.69□□□□□ -2.14
Limd1Q9QXD8 Gm27493-201ENSMUST00000184128 78 ntBASIC1.69□□□□□ -2.14
Limd1Q9QXD8 Mir876-201ENSMUST00000104659 81 ntBASIC1.68□□□□□ -2.14
Limd1Q9QXD8 Gm24174-201ENSMUST00000158933 111 ntBASIC1.68□□□□□ -2.14
Limd1Q9QXD8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Limd1Q9QXD8 Gm23766-201ENSMUST00000103894 80 ntBASIC1.67□□□□□ -2.14
Limd1Q9QXD8 Gm24580-201ENSMUST00000103965 131 ntBASIC1.67□□□□□ -2.14
Limd1Q9QXD8 Gm24233-201ENSMUST00000104317 122 ntBASIC1.66□□□□□ -2.14
Limd1Q9QXD8 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.66□□□□□ -2.14
Limd1Q9QXD8 Gm42533-201ENSMUST00000196247 157 ntBASIC1.66□□□□□ -2.14
Limd1Q9QXD8 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Limd1Q9QXD8 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Limd1Q9QXD8 Gm22386-201ENSMUST00000158192 129 ntBASIC1.65□□□□□ -2.15
Limd1Q9QXD8 Gm27265-201ENSMUST00000183559 77 ntBASIC1.65□□□□□ -2.15
Limd1Q9QXD8 Mir7665-201ENSMUST00000184907 63 ntBASIC1.65□□□□□ -2.15
Limd1Q9QXD8 Gm45655-201ENSMUST00000211625 160 ntBASIC1.65□□□□□ -2.15
Limd1Q9QXD8 Gm45754-201ENSMUST00000212380 279 ntBASIC1.65□□□□□ -2.15
Limd1Q9QXD8 Gm27549-201ENSMUST00000183508 62 ntBASIC1.64□□□□□ -2.15
Limd1Q9QXD8 Gm29432-201ENSMUST00000185397 139 ntBASIC1.64□□□□□ -2.15
Limd1Q9QXD8 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.64□□□□□ -2.15
Limd1Q9QXD8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Limd1Q9QXD8 Gm23012-201ENSMUST00000104149 83 ntBASIC1.63□□□□□ -2.15
Limd1Q9QXD8 Gm25328-201ENSMUST00000175013 107 ntBASIC1.63□□□□□ -2.15
Limd1Q9QXD8 Gm27248-201ENSMUST00000184004 166 ntBASIC1.63□□□□□ -2.15
Limd1Q9QXD8 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.63□□□□□ -2.15
Limd1Q9QXD8 Gm25552-201ENSMUST00000158081 91 ntBASIC1.62□□□□□ -2.15
Limd1Q9QXD8 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.62□□□□□ -2.15
Limd1Q9QXD8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Limd1Q9QXD8 Gm24396-201ENSMUST00000116905 93 ntBASIC1.61□□□□□ -2.15
Limd1Q9QXD8 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.61□□□□□ -2.15
Limd1Q9QXD8 Mir8116-201ENSMUST00000184134 97 ntBASIC1.61□□□□□ -2.15
Limd1Q9QXD8 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Gm22663-201ENSMUST00000158721 102 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Gm24222-201ENSMUST00000158834 93 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Mir3108-201ENSMUST00000175500 79 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Mir7010-201ENSMUST00000183464 63 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Snord45b-201ENSMUST00000082797 71 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Snord95-201ENSMUST00000082846 68 ntBASIC1.6□□□□□ -2.15
Limd1Q9QXD8 Mir669h-201ENSMUST00000116944 125 ntBASIC1.59□□□□□ -2.15
Limd1Q9QXD8 Gm24500-201ENSMUST00000158447 124 ntBASIC1.59□□□□□ -2.15
Limd1Q9QXD8 Gm25166-201ENSMUST00000158909 111 ntBASIC1.59□□□□□ -2.15
Limd1Q9QXD8 Gm23416-201ENSMUST00000175520 95 ntBASIC1.59□□□□□ -2.15
Limd1Q9QXD8 Mir6351-201ENSMUST00000183826 99 ntBASIC1.59□□□□□ -2.15
Limd1Q9QXD8 Gm42677-201ENSMUST00000196363 127 ntBASIC1.59□□□□□ -2.15
Limd1Q9QXD8 Gm43911-201ENSMUST00000203097 76 ntBASIC1.59□□□□□ -2.15
Limd1Q9QXD8 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Limd1Q9QXD8 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.58□□□□□ -2.16
Limd1Q9QXD8 Gm24331-201ENSMUST00000175099 67 ntBASIC1.58□□□□□ -2.16
Limd1Q9QXD8 Mir3098-201ENSMUST00000175416 87 ntBASIC1.58□□□□□ -2.16
Limd1Q9QXD8 Gm23801-201ENSMUST00000175561 67 ntBASIC1.58□□□□□ -2.16
Limd1Q9QXD8 Gm24485-201ENSMUST00000178283 67 ntBASIC1.58□□□□□ -2.16
Limd1Q9QXD8 Gm27554-201ENSMUST00000185074 98 ntBASIC1.58□□□□□ -2.16
Limd1Q9QXD8 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.58□□□□□ -2.16
Limd1Q9QXD8 Gm22520-201ENSMUST00000158269 129 ntBASIC1.57□□□□□ -2.16
Limd1Q9QXD8 Gm44211-201ENSMUST00000204867 145 ntBASIC1.57□□□□□ -2.16
Limd1Q9QXD8 Gm24165-201ENSMUST00000082718 128 ntBASIC1.57□□□□□ -2.16
Limd1Q9QXD8 Gm22603-201ENSMUST00000157603 96 ntBASIC1.56□□□□□ -2.16
Limd1Q9QXD8 Mir15a-201ENSMUST00000175266 84 ntBASIC1.56□□□□□ -2.16
Limd1Q9QXD8 Mir101a-201ENSMUST00000083517 83 ntBASIC1.56□□□□□ -2.16
Limd1Q9QXD8 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Limd1Q9QXD8 Gm25656-201ENSMUST00000158466 66 ntBASIC1.55□□□□□ -2.16
Limd1Q9QXD8 Gm25641-201ENSMUST00000175135 108 ntBASIC1.55□□□□□ -2.16
Limd1Q9QXD8 Gm25300-201ENSMUST00000175284 84 ntBASIC1.55□□□□□ -2.16
Limd1Q9QXD8 Mir6962-201ENSMUST00000199512 63 ntBASIC1.55□□□□□ -2.16
Limd1Q9QXD8 Gm25496-201ENSMUST00000104430 120 ntBASIC1.54□□□□□ -2.16
Limd1Q9QXD8 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.54□□□□□ -2.16
Limd1Q9QXD8 Gm23856-201ENSMUST00000158380 99 ntBASIC1.54□□□□□ -2.16
Limd1Q9QXD8 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Limd1Q9QXD8 Mir343-201ENSMUST00000102360 75 ntBASIC1.53□□□□□ -2.16
Limd1Q9QXD8 Gm27894-201ENSMUST00000184177 92 ntBASIC1.53□□□□□ -2.16
Limd1Q9QXD8 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.53□□□□□ -2.16
Limd1Q9QXD8 Gm26082-201ENSMUST00000104070 127 ntBASIC1.52□□□□□ -2.17
Limd1Q9QXD8 Gm25495-201ENSMUST00000104431 131 ntBASIC1.52□□□□□ -2.17
Limd1Q9QXD8 Gm25138-201ENSMUST00000083248 136 ntBASIC1.52□□□□□ -2.17
Limd1Q9QXD8 Mir494-201ENSMUST00000093632 85 ntBASIC1.52□□□□□ -2.17
Limd1Q9QXD8 Gm24942-201ENSMUST00000158328 114 ntBASIC1.51□□□□□ -2.17
Limd1Q9QXD8 Mir3968-201ENSMUST00000175355 100 ntBASIC1.51□□□□□ -2.17
Limd1Q9QXD8 Gm27937-201ENSMUST00000183605 88 ntBASIC1.51□□□□□ -2.17
Limd1Q9QXD8 Gm27977-201ENSMUST00000185159 111 ntBASIC1.51□□□□□ -2.17
Limd1Q9QXD8 Gm26438-201ENSMUST00000082593 107 ntBASIC1.51□□□□□ -2.17
Limd1Q9QXD8 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Limd1Q9QXD8 Gm24379-201ENSMUST00000122695 86 ntBASIC1.5□□□□□ -2.17
Limd1Q9QXD8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms