Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Mir6406-201ENSMUST00000183592 120 ntBASIC1,48□□□□□ -2,17
Upk3bl1Q9D701 Mir15b-201ENSMUST00000083646 64 ntBASIC1,48□□□□□ -2,17
Upk3bl1Q9D701 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1,48□□□□□ -2,17
Upk3bl1Q9D701 n-R5s159-201ENSMUST00000122681 120 ntBASIC1,47□□□□□ -2,17
Upk3bl1Q9D701 Gm27937-201ENSMUST00000183605 88 ntBASIC1,47□□□□□ -2,17
Upk3bl1Q9D701 Gm27977-201ENSMUST00000185159 111 ntBASIC1,47□□□□□ -2,17
Upk3bl1Q9D701 Gm43885-201ENSMUST00000204928 2542 ntBASIC1,47□□□□□ -2,17
Upk3bl1Q9D701 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,47□□□□□ -2,17
Upk3bl1Q9D701 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,46□□□□□ -2,18
Upk3bl1Q9D701 Mir669h-201ENSMUST00000116944 125 ntBASIC1,46□□□□□ -2,18
Upk3bl1Q9D701 Gm22233-201ENSMUST00000157464 114 ntBASIC1,46□□□□□ -2,18
Upk3bl1Q9D701 Gm25183-201ENSMUST00000157752 106 ntBASIC1,46□□□□□ -2,18
Upk3bl1Q9D701 Gm25868-201ENSMUST00000158253 114 ntBASIC1,46□□□□□ -2,18
Upk3bl1Q9D701 Gm22663-201ENSMUST00000158721 102 ntBASIC1,46□□□□□ -2,18
Upk3bl1Q9D701 Snord95-201ENSMUST00000082846 68 ntBASIC1,46□□□□□ -2,18
Upk3bl1Q9D701 Gm26257-201ENSMUST00000122500 107 ntBASIC1,45□□□□□ -2,18
Upk3bl1Q9D701 Gm22520-201ENSMUST00000158269 129 ntBASIC1,45□□□□□ -2,18
Upk3bl1Q9D701 Gm25836-201ENSMUST00000158918 123 ntBASIC1,45□□□□□ -2,18
Upk3bl1Q9D701 Gm24177-201ENSMUST00000158927 131 ntBASIC1,45□□□□□ -2,18
Upk3bl1Q9D701 Gm44962-201ENSMUST00000206460 279 ntBASIC1,45□□□□□ -2,18
Upk3bl1Q9D701 Gm26438-201ENSMUST00000082593 107 ntBASIC1,45□□□□□ -2,18
Upk3bl1Q9D701 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,44□□□□□ -2,18
Upk3bl1Q9D701 Gm24895-201ENSMUST00000122742 74 ntBASIC1,44□□□□□ -2,18
Upk3bl1Q9D701 Gm25641-201ENSMUST00000175135 108 ntBASIC1,44□□□□□ -2,18
Upk3bl1Q9D701 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,44□□□□□ -2,18
Upk3bl1Q9D701 Gm5581-201ENSMUST00000072940 2550 ntBASIC1,44□□□□□ -2,18
Upk3bl1Q9D701 Gm28383-201ENSMUST00000187563 139 ntBASIC1,43□□□□□ -2,18
Upk3bl1Q9D701 AC147560.1-201ENSMUST00000197528 107 ntBASIC1,43□□□□□ -2,18
Upk3bl1Q9D701 Gm25128-201ENSMUST00000083339 76 ntBASIC1,43□□□□□ -2,18
Upk3bl1Q9D701 Gm24927-201ENSMUST00000083397 107 ntBASIC1,43□□□□□ -2,18
Upk3bl1Q9D701 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,43□□□□□ -2,18
Upk3bl1Q9D701 Gm23109-201ENSMUST00000116867 126 ntBASIC1,42□□□□□ -2,18
Upk3bl1Q9D701 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,42□□□□□ -2,18
Upk3bl1Q9D701 Mir7673-201ENSMUST00000184567 64 ntBASIC1,42□□□□□ -2,18
Upk3bl1Q9D701 Gm42533-201ENSMUST00000196247 157 ntBASIC1,42□□□□□ -2,18
Upk3bl1Q9D701 Gm42677-201ENSMUST00000196363 127 ntBASIC1,42□□□□□ -2,18
Upk3bl1Q9D701 Gm26181-201ENSMUST00000157687 106 ntBASIC1,41□□□□□ -2,18
Upk3bl1Q9D701 Mir3098-201ENSMUST00000175416 87 ntBASIC1,41□□□□□ -2,18
Upk3bl1Q9D701 Gm43512-201ENSMUST00000198495 176 ntBASIC1,41□□□□□ -2,18
Upk3bl1Q9D701 Gm44211-201ENSMUST00000204867 145 ntBASIC1,41□□□□□ -2,18
Upk3bl1Q9D701 Gm22723-201ENSMUST00000083820 129 ntBASIC1,41□□□□□ -2,18
Upk3bl1Q9D701 Gm27450-201ENSMUST00000104632 90 ntBASIC1,4□□□□□ -2,19
Upk3bl1Q9D701 Gm15115-201ENSMUST00000121145 264 ntBASIC1,4□□□□□ -2,19
Upk3bl1Q9D701 Gm23670-201ENSMUST00000157469 119 ntBASIC1,4□□□□□ -2,19
Upk3bl1Q9D701 Gm22087-201ENSMUST00000158339 88 ntBASIC1,4□□□□□ -2,19
Upk3bl1Q9D701 Mir7026-201ENSMUST00000184384 67 ntBASIC1,4□□□□□ -2,19
Upk3bl1Q9D701 Mir6352-201ENSMUST00000184495 116 ntBASIC1,4□□□□□ -2,19
Upk3bl1Q9D701 Gm22459-201ENSMUST00000082577 108 ntBASIC1,4□□□□□ -2,19
Upk3bl1Q9D701 Gm23010-201ENSMUST00000104151 126 ntBASIC1,39□□□□□ -2,19
Upk3bl1Q9D701 Scarna3b-201ENSMUST00000157533 139 ntBASIC1,39□□□□□ -2,19
Upk3bl1Q9D701 Gm25656-201ENSMUST00000158466 66 ntBASIC1,39□□□□□ -2,19
Upk3bl1Q9D701 Gm23416-201ENSMUST00000175520 95 ntBASIC1,39□□□□□ -2,19
Upk3bl1Q9D701 Mir669n-201ENSMUST00000158636 54 ntBASIC1,38□□□□□ -2,19
Upk3bl1Q9D701 Mir7010-201ENSMUST00000183464 63 ntBASIC1,38□□□□□ -2,19
Upk3bl1Q9D701 Gm24624-201ENSMUST00000082617 164 ntBASIC1,38□□□□□ -2,19
Upk3bl1Q9D701 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1,38□□□□□ -2,19
Upk3bl1Q9D701 Gm24701-201ENSMUST00000101946 105 ntBASIC1,37□□□□□ -2,19
Upk3bl1Q9D701 Snord13-201ENSMUST00000157627 104 ntBASIC1,37□□□□□ -2,19
Upk3bl1Q9D701 Gm23072-201ENSMUST00000158243 123 ntBASIC1,37□□□□□ -2,19
Upk3bl1Q9D701 Gm44408-201ENSMUST00000200205 66 ntBASIC1,37□□□□□ -2,19
Upk3bl1Q9D701 Gm25055-201ENSMUST00000157369 76 ntBASIC1,36□□□□□ -2,19
Upk3bl1Q9D701 Mir8090-201ENSMUST00000185078 136 ntBASIC1,36□□□□□ -2,19
Upk3bl1Q9D701 Mir3569-201ENSMUST00000185080 58 ntBASIC1,36□□□□□ -2,19
Upk3bl1Q9D701 Gm28794-201ENSMUST00000185276 136 ntBASIC1,36□□□□□ -2,19
Upk3bl1Q9D701 Gm25138-201ENSMUST00000083248 136 ntBASIC1,36□□□□□ -2,19
Upk3bl1Q9D701 Gm25652-201ENSMUST00000083780 103 ntBASIC1,36□□□□□ -2,19
Upk3bl1Q9D701 Mir3071-201ENSMUST00000093621 80 ntBASIC1,36□□□□□ -2,19
Upk3bl1Q9D701 Mir758-201ENSMUST00000103260 81 ntBASIC1,35□□□□□ -2,19
Upk3bl1Q9D701 Gm14533-201ENSMUST00000117088 93 ntBASIC1,35□□□□□ -2,19
Upk3bl1Q9D701 Gm23221-201ENSMUST00000158118 93 ntBASIC1,35□□□□□ -2,19
Upk3bl1Q9D701 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,35□□□□□ -2,19
Upk3bl1Q9D701 Gm26922-201ENSMUST00000082687 72 ntBASIC1,35□□□□□ -2,19
Upk3bl1Q9D701 Gm22039-201ENSMUST00000157278 132 ntBASIC1,34□□□□□ -2,19
Upk3bl1Q9D701 Mir15a-201ENSMUST00000175266 84 ntBASIC1,34□□□□□ -2,19
Upk3bl1Q9D701 Gm25648-201ENSMUST00000177844 79 ntBASIC1,34□□□□□ -2,19
Upk3bl1Q9D701 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1,34□□□□□ -2,2
Upk3bl1Q9D701 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Gm23048-201ENSMUST00000157237 129 ntBASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Gm22078-201ENSMUST00000157593 103 ntBASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Gm24394-201ENSMUST00000158141 123 ntBASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Gm26139-201ENSMUST00000180098 107 ntBASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Mir7679-201ENSMUST00000183379 63 ntBASIC1,33□□□□□ -2,2
Upk3bl1Q9D701 Gm44483-201ENSMUST00000197203 97 ntBASIC1,32□□□□□ -2,2
Upk3bl1Q9D701 Gm25495-201ENSMUST00000104431 131 ntBASIC1,31□□□□□ -2,2
Upk3bl1Q9D701 Gm23672-201ENSMUST00000157471 107 ntBASIC1,31□□□□□ -2,2
Upk3bl1Q9D701 CT030170.1-201ENSMUST00000222183 148 ntBASIC1,31□□□□□ -2,2
Upk3bl1Q9D701 Gm24288-201ENSMUST00000157630 144 ntBASIC1,3□□□□□ -2,2
Upk3bl1Q9D701 Gm25440-201ENSMUST00000158279 154 ntBASIC1,3□□□□□ -2,2
Upk3bl1Q9D701 Gm23289-201ENSMUST00000175615 108 ntBASIC1,3□□□□□ -2,2
Upk3bl1Q9D701 Gm27980-201ENSMUST00000184094 169 ntBASIC1,3□□□□□ -2,2
Upk3bl1Q9D701 Gm23558-201ENSMUST00000157823 80 ntBASIC1,29□□□□□ -2,2
Upk3bl1Q9D701 Gm24725-201ENSMUST00000158229 125 ntBASIC1,29□□□□□ -2,2
Upk3bl1Q9D701 Gm25894-201ENSMUST00000083458 75 ntBASIC1,29□□□□□ -2,2
Upk3bl1Q9D701 Mir487b-201ENSMUST00000102265 82 ntBASIC1,28□□□□□ -2,2
Upk3bl1Q9D701 Gm22556-201ENSMUST00000157803 100 ntBASIC1,28□□□□□ -2,2
Upk3bl1Q9D701 Gm24942-201ENSMUST00000158328 114 ntBASIC1,28□□□□□ -2,2
Upk3bl1Q9D701 Gm25715-201ENSMUST00000158627 125 ntBASIC1,28□□□□□ -2,2
Retrieved 100 of 76,532 protein–RNA pairs in 123,7 ms