Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mir377-201ENSMUST00000083504 68 ntBASIC1,61□□□□□ -2,15
Trim42Q9D2H5 Snord69-201ENSMUST00000104024 80 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 Gm23109-201ENSMUST00000116867 126 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 Gm22663-201ENSMUST00000158721 102 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim42Q9D2H5 Mir376b-201ENSMUST00000195930 82 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 AL928567.1-201ENSMUST00000197891 138 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 AC211878.4-201ENSMUST00000220970 262 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 Gm22459-201ENSMUST00000082577 108 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 Mir324-201ENSMUST00000083600 89 ntBASIC1,6□□□□□ -2,15
Trim42Q9D2H5 Gm22466-201ENSMUST00000175278 69 ntBASIC1,59□□□□□ -2,15
Trim42Q9D2H5 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,59□□□□□ -2,15
Trim42Q9D2H5 Mir6406-201ENSMUST00000183592 120 ntBASIC1,59□□□□□ -2,15
Trim42Q9D2H5 Gm22717-201ENSMUST00000122703 171 ntBASIC1,58□□□□□ -2,16
Trim42Q9D2H5 Gm26274-201ENSMUST00000157103 321 ntBASIC1,58□□□□□ -2,16
Trim42Q9D2H5 Gm44483-201ENSMUST00000197203 97 ntBASIC1,58□□□□□ -2,16
Trim42Q9D2H5 Gm43512-201ENSMUST00000198495 176 ntBASIC1,58□□□□□ -2,16
Trim42Q9D2H5 Gm29344-201ENSMUST00000068143 210 ntBASIC1,58□□□□□ -2,16
Trim42Q9D2H5 Gm25279-201ENSMUST00000122608 133 ntBASIC1,57□□□□□ -2,16
Trim42Q9D2H5 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,57□□□□□ -2,16
Trim42Q9D2H5 Gm26375-201ENSMUST00000101829 106 ntBASIC1,56□□□□□ -2,16
Trim42Q9D2H5 Mir669h-201ENSMUST00000116944 125 ntBASIC1,56□□□□□ -2,16
Trim42Q9D2H5 Mir669n-201ENSMUST00000158636 54 ntBASIC1,56□□□□□ -2,16
Trim42Q9D2H5 Mir6342-201ENSMUST00000183870 125 ntBASIC1,56□□□□□ -2,16
Trim42Q9D2H5 Mir758-201ENSMUST00000103260 81 ntBASIC1,55□□□□□ -2,16
Trim42Q9D2H5 Gm23012-201ENSMUST00000104149 83 ntBASIC1,55□□□□□ -2,16
Trim42Q9D2H5 Gm23130-201ENSMUST00000104252 74 ntBASIC1,55□□□□□ -2,16
Trim42Q9D2H5 Scarna3b-201ENSMUST00000157533 139 ntBASIC1,55□□□□□ -2,16
Trim42Q9D2H5 Gm22556-201ENSMUST00000157803 100 ntBASIC1,55□□□□□ -2,16
Trim42Q9D2H5 Gm24549-201ENSMUST00000158647 139 ntBASIC1,55□□□□□ -2,16
Trim42Q9D2H5 Gm23708-201ENSMUST00000104367 123 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Gm24895-201ENSMUST00000122742 74 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Gm25440-201ENSMUST00000158279 154 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Gm25010-201ENSMUST00000158403 65 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Gm25836-201ENSMUST00000158918 123 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Gm24174-201ENSMUST00000158933 111 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Mir100-201ENSMUST00000175270 80 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Gm27420-201ENSMUST00000183823 79 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Mir7017-201ENSMUST00000184894 62 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Gm26438-201ENSMUST00000082593 107 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Mir3071-201ENSMUST00000093621 80 ntBASIC1,54□□□□□ -2,16
Trim42Q9D2H5 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Gm26181-201ENSMUST00000157687 106 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Mir8090-201ENSMUST00000185078 136 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 AC147560.1-201ENSMUST00000197528 107 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Mir1949-202ENSMUST00000199259 70 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Gm26224-201ENSMUST00000082506 80 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Gm26922-201ENSMUST00000082687 72 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Snord95-201ENSMUST00000082846 68 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Mir30a-201ENSMUST00000083471 71 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Gm22723-201ENSMUST00000083820 129 ntBASIC1,53□□□□□ -2,16
Trim42Q9D2H5 Gm24177-201ENSMUST00000158927 131 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Traj60-201ENSMUST00000167781 54 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Gm26491-201ENSMUST00000179268 121 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Mir7679-201ENSMUST00000183379 63 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Mir7026-201ENSMUST00000184384 67 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Mir6352-201ENSMUST00000184495 116 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Gm42677-201ENSMUST00000196363 127 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Gm22652-201ENSMUST00000083207 131 ntBASIC1,52□□□□□ -2,17
Trim42Q9D2H5 Gm25968-201ENSMUST00000157167 100 ntBASIC1,51□□□□□ -2,17
Trim42Q9D2H5 Gm22551-201ENSMUST00000157795 103 ntBASIC1,51□□□□□ -2,17
Trim42Q9D2H5 Mir500-201ENSMUST00000093600 92 ntBASIC1,51□□□□□ -2,17
Trim42Q9D2H5 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,51□□□□□ -2,17
Trim42Q9D2H5 Gm27717-201ENSMUST00000183933 151 ntBASIC1,5□□□□□ -2,17
Trim42Q9D2H5 Gm13065-201ENSMUST00000119178 141 ntBASIC1,49□□□□□ -2,17
Trim42Q9D2H5 Gm22559-201ENSMUST00000157329 134 ntBASIC1,49□□□□□ -2,17
Trim42Q9D2H5 Gm23221-201ENSMUST00000158118 93 ntBASIC1,49□□□□□ -2,17
Trim42Q9D2H5 Gm24394-201ENSMUST00000158141 123 ntBASIC1,49□□□□□ -2,17
Trim42Q9D2H5 Gm23010-201ENSMUST00000104151 126 ntBASIC1,48□□□□□ -2,17
Trim42Q9D2H5 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1,48□□□□□ -2,17
Trim42Q9D2H5 Gm24996-201ENSMUST00000158390 99 ntBASIC1,48□□□□□ -2,17
Trim42Q9D2H5 Gm16399-201ENSMUST00000181423 219 ntBASIC1,48□□□□□ -2,17
Trim42Q9D2H5 Gm38323-201ENSMUST00000192450 210 ntBASIC1,48□□□□□ -2,17
Trim42Q9D2H5 Gm24233-201ENSMUST00000104317 122 ntBASIC1,47□□□□□ -2,17
Trim42Q9D2H5 Gm6272-201ENSMUST00000121256 171 ntBASIC1,47□□□□□ -2,17
Trim42Q9D2H5 Gm23590-201ENSMUST00000157661 104 ntBASIC1,47□□□□□ -2,17
Trim42Q9D2H5 Gm24797-201ENSMUST00000178103 107 ntBASIC1,47□□□□□ -2,17
Trim42Q9D2H5 Gm22474-201ENSMUST00000179407 107 ntBASIC1,47□□□□□ -2,17
Trim42Q9D2H5 AC117232.1-201ENSMUST00000197964 119 ntBASIC1,47□□□□□ -2,17
Trim42Q9D2H5 Gm24070-201ENSMUST00000104519 130 ntBASIC1,46□□□□□ -2,18
Trim42Q9D2H5 Gm23048-201ENSMUST00000157237 129 ntBASIC1,46□□□□□ -2,18
Trim42Q9D2H5 Gm23670-201ENSMUST00000157469 119 ntBASIC1,46□□□□□ -2,18
Trim42Q9D2H5 Gm24500-201ENSMUST00000158447 124 ntBASIC1,46□□□□□ -2,18
Trim42Q9D2H5 Gm25656-201ENSMUST00000158466 66 ntBASIC1,46□□□□□ -2,18
Trim42Q9D2H5 Gm14533-201ENSMUST00000117088 93 ntBASIC1,45□□□□□ -2,18
Trim42Q9D2H5 Gm27711-201ENSMUST00000183802 118 ntBASIC1,45□□□□□ -2,18
Trim42Q9D2H5 Mir3569-201ENSMUST00000185080 58 ntBASIC1,45□□□□□ -2,18
Trim42Q9D2H5 Gm44408-201ENSMUST00000200205 66 ntBASIC1,45□□□□□ -2,18
Trim42Q9D2H5 Gm15115-201ENSMUST00000121145 264 ntBASIC1,44□□□□□ -2,18
Trim42Q9D2H5 Gm25055-201ENSMUST00000157369 76 ntBASIC1,44□□□□□ -2,18
Trim42Q9D2H5 Gm24288-201ENSMUST00000157630 144 ntBASIC1,44□□□□□ -2,18
Trim42Q9D2H5 Gm24400-201ENSMUST00000157865 107 ntBASIC1,44□□□□□ -2,18
Trim42Q9D2H5 Gm24808-201ENSMUST00000157993 118 ntBASIC1,44□□□□□ -2,18
Trim42Q9D2H5 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1,44□□□□□ -2,18
Trim42Q9D2H5 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1,43□□□□□ -2,18
Trim42Q9D2H5 Gm22761-201ENSMUST00000102278 96 ntBASIC1,43□□□□□ -2,18
Trim42Q9D2H5 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,43□□□□□ -2,18
Trim42Q9D2H5 Gm25087-201ENSMUST00000101992 78 ntBASIC1,42□□□□□ -2,18
Trim42Q9D2H5 Gm24271-201ENSMUST00000102327 111 ntBASIC1,42□□□□□ -2,18
Retrieved 100 of 76,532 protein–RNA pairs in 106,9 ms