Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.44□□□□□ -2.48
Vps28Q9D1C8 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.44□□□□□ -2.48
Vps28Q9D1C8 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0.44□□□□□ -2.48
Vps28Q9D1C8 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.45□□□□□ -2.48
Vps28Q9D1C8 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.45□□□□□ -2.48
Vps28Q9D1C8 Gm25370-201ENSMUST00000158159 94 ntBASIC-0.45□□□□□ -2.48
Vps28Q9D1C8 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.45□□□□□ -2.48
Vps28Q9D1C8 Gm24947-201ENSMUST00000158334 110 ntBASIC-0.46□□□□□ -2.48
Vps28Q9D1C8 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.46□□□□□ -2.48
Vps28Q9D1C8 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.46□□□□□ -2.48
Vps28Q9D1C8 Gm22911-201ENSMUST00000177920 107 ntBASIC-0.46□□□□□ -2.48
Vps28Q9D1C8 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.47□□□□□ -2.48
Vps28Q9D1C8 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.47□□□□□ -2.48
Vps28Q9D1C8 Gm43324-201ENSMUST00000197482 289 ntBASIC-0.47□□□□□ -2.48
Vps28Q9D1C8 Mir327-201ENSMUST00000199328 69 ntBASIC-0.47□□□□□ -2.48
Vps28Q9D1C8 Gm44859-201ENSMUST00000207831 94 ntBASIC-0.47□□□□□ -2.48
Vps28Q9D1C8 Gm26412-201ENSMUST00000157666 55 ntBASIC-0.48□□□□□ -2.49
Vps28Q9D1C8 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.48□□□□□ -2.49
Vps28Q9D1C8 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.48□□□□□ -2.49
Vps28Q9D1C8 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.48□□□□□ -2.49
Vps28Q9D1C8 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.48□□□□□ -2.49
Vps28Q9D1C8 Mir141-201ENSMUST00000083540 72 ntBASIC-0.48□□□□□ -2.49
Vps28Q9D1C8 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
Vps28Q9D1C8 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.49□□□□□ -2.49
Vps28Q9D1C8 Gm25071-201ENSMUST00000175232 70 ntBASIC-0.49□□□□□ -2.49
Vps28Q9D1C8 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.5□□□□□ -2.49
Vps28Q9D1C8 Gm22406-201ENSMUST00000174923 93 ntBASIC-0.5□□□□□ -2.49
Vps28Q9D1C8 Gm43977-201ENSMUST00000203970 189 ntBASIC-0.5□□□□□ -2.49
Vps28Q9D1C8 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.51□□□□□ -2.49
Vps28Q9D1C8 Mir669h-201ENSMUST00000116944 125 ntBASIC-0.51□□□□□ -2.49
Vps28Q9D1C8 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.51□□□□□ -2.49
Vps28Q9D1C8 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.51□□□□□ -2.49
Vps28Q9D1C8 Gm22203-201ENSMUST00000158605 58 ntBASIC-0.51□□□□□ -2.49
Vps28Q9D1C8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
Vps28Q9D1C8 Gm14533-201ENSMUST00000117088 93 ntBASIC-0.53□□□□□ -2.49
Vps28Q9D1C8 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.53□□□□□ -2.49
Vps28Q9D1C8 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.53□□□□□ -2.49
Vps28Q9D1C8 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
Vps28Q9D1C8 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.53□□□□□ -2.49
Vps28Q9D1C8 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.54□□□□□ -2.5
Vps28Q9D1C8 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.55□□□□□ -2.5
Vps28Q9D1C8 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.55□□□□□ -2.5
Vps28Q9D1C8 Gm24001-201ENSMUST00000158463 85 ntBASIC-0.55□□□□□ -2.5
Vps28Q9D1C8 mt-Tn-201ENSMUST00000082399 71 ntBASIC-0.55□□□□□ -2.5
Vps28Q9D1C8 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.55□□□□□ -2.5
Vps28Q9D1C8 Gm24683-201ENSMUST00000104840 88 ntBASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 Gm25425-201ENSMUST00000157611 96 ntBASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.56□□□□□ -2.5
Vps28Q9D1C8 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.57□□□□□ -2.5
Vps28Q9D1C8 Gm23500-201ENSMUST00000157735 98 ntBASIC-0.58□□□□□ -2.5
Vps28Q9D1C8 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.59□□□□□ -2.5
Vps28Q9D1C8 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.6□□□□□ -2.51
Vps28Q9D1C8 Gm42677-201ENSMUST00000196363 127 ntBASIC-0.6□□□□□ -2.51
Vps28Q9D1C8 AC164561.1-201ENSMUST00000220414 115 ntBASIC-0.61□□□□□ -2.51
Vps28Q9D1C8 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.61□□□□□ -2.51
Vps28Q9D1C8 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.61□□□□□ -2.51
Vps28Q9D1C8 Gm10813-201ENSMUST00000099936 90 ntBASIC-0.61□□□□□ -2.51
Vps28Q9D1C8 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.62□□□□□ -2.51
Vps28Q9D1C8 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.62□□□□□ -2.51
Vps28Q9D1C8 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.62□□□□□ -2.51
Vps28Q9D1C8 Gm22297-201ENSMUST00000083312 106 ntBASIC-0.62□□□□□ -2.51
Vps28Q9D1C8 Gm24697-201ENSMUST00000083881 107 ntBASIC-0.62□□□□□ -2.51
Vps28Q9D1C8 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.63□□□□□ -2.51
Vps28Q9D1C8 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.64□□□□□ -2.51
Vps28Q9D1C8 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.66□□□□□ -2.52
Vps28Q9D1C8 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.66□□□□□ -2.52
Vps28Q9D1C8 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.66□□□□□ -2.52
Vps28Q9D1C8 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.67□□□□□ -2.52
Vps28Q9D1C8 Snora26-201ENSMUST00000175614 121 ntBASIC-0.67□□□□□ -2.52
Vps28Q9D1C8 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.67□□□□□ -2.52
Vps28Q9D1C8 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.68□□□□□ -2.52
Vps28Q9D1C8 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.68□□□□□ -2.52
Vps28Q9D1C8 Gm22384-201ENSMUST00000158187 104 ntBASIC-0.68□□□□□ -2.52
Vps28Q9D1C8 Mir6237-201ENSMUST00000183808 91 ntBASIC-0.68□□□□□ -2.52
Vps28Q9D1C8 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.68□□□□□ -2.52
Vps28Q9D1C8 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.68□□□□□ -2.52
Vps28Q9D1C8 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.68□□□□□ -2.52
Vps28Q9D1C8 Gm23434-201ENSMUST00000157179 100 ntBASIC-0.69□□□□□ -2.52
Vps28Q9D1C8 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.69□□□□□ -2.52
Vps28Q9D1C8 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.69□□□□□ -2.52
Vps28Q9D1C8 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.7□□□□□ -2.52
Vps28Q9D1C8 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.7□□□□□ -2.52
Vps28Q9D1C8 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.7□□□□□ -2.52
Vps28Q9D1C8 AC140930.2-201ENSMUST00000221803 109 ntBASIC-0.7□□□□□ -2.52
Vps28Q9D1C8 Mir369-201ENSMUST00000083627 79 ntBASIC-0.7□□□□□ -2.52
Vps28Q9D1C8 Mir183-201ENSMUST00000083685 70 ntBASIC-0.7□□□□□ -2.52
Vps28Q9D1C8 Gm26109-201ENSMUST00000083970 70 ntBASIC-0.71□□□□□ -2.52
Vps28Q9D1C8 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.72□□□□□ -2.52
Vps28Q9D1C8 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-0.73□□□□□ -2.53
Vps28Q9D1C8 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.73□□□□□ -2.53
Vps28Q9D1C8 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.74□□□□□ -2.53
Vps28Q9D1C8 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.74□□□□□ -2.53
Vps28Q9D1C8 Gm22286-201ENSMUST00000179708 107 ntBASIC-0.75□□□□□ -2.53
Vps28Q9D1C8 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.75□□□□□ -2.53
Vps28Q9D1C8 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms